ggKbase home page

13_1_20cm_2_scaffold_4650_6

Organism: 13_1_20CM_2_Acidobacteria_68_7

partial RP 12 / 55 MC: 1 BSCG 11 / 51 ASCG 4 / 38 MC: 1
Location: comp(7474..10029)

Top 3 Functional Annotations

Value Algorithm Source
Secreted protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJ81_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 848.0
  • Bit_score: 771
  • Evalue 7.60e-220
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 817.0
  • Bit_score: 869
  • Evalue 2.90e-249
periplasmic component of the Tol biopolymer transport system similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 843.0
  • Bit_score: 742
  • Evalue 1.10e-211

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Gammaproteobacteria_61_13 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2556
ATGATCGAGCGGAAGAAGCTCCGGGGACTGCTGGCGGCGGTCATCGCGGTCGCGGGAGCCCCCGCCGTCTCCGCCCCGGGTCCGACTGGGCGCGAGATCGTCCTGAAGCAGATTGACCTGCCGCATCATTATTACTACCGGGAGATGTACCTGCCGCAGGCGACGACCGGGCCCGGTTCGGTCGCCTGGTCCCCGGACGGCGCCGAGGTCGTGTACTCGATGCAGGGCTCGCTCTGGCGTCAGAGACTGGGCACCTCGGTGGCCCGGCAGATCACCGACGGCCCCGGCTACGACTACCAGCCCGACTGGTCGACGGACGGACGCTTCATCGCCTATGCCTCGTACCGGGACGACGCCGTCGAAATCTGGCTGCTGGACGCCGACAACGGCACGGCGCGGCCGGTCACCCGCAACGGGGCGGTCAACGTCGAGCCGCGCTTCTCGCCCGACGGCCGGCGTCTCGCCTTCGTGTCGACCGTCTACAACCGGCGATTCCACATCCACACGGTCGACCTCGATGCGAGCGGCGCTCCGGGCGAGGTCGAGCGGCTGACCGAAGACCACGACAGCGGGCTGCCGCGTTACTACTACGGCCCGTTCGATCACTACATCTCGCCCTCCTGGTCGCCGGACGGCAAGGAGGTCGTGTTCGTCTCCAACCGCGGGCGCGTCTGGGGCACGGGGGGCTTCTGGAGGATGAAGGCGTCCCCCGGCGCCGAGATGCGCGAGATCCGCTACGAGGAGACCAACTGGAGGGCCCGGCCGGACTGGTCGCCGGACGGCCGGCGGATCGTCTACAGCTCCTACCTCGGAGGACAGTGGCACCATCTCTGGCTCATGACCGACGAGGGCGGCGACGTCCTGCCGATCACCTATGGTGATTTCGATGCCACCTCGCCGCGCTGGTCGCGCGATGGGCGGCGGATCGCCTACGTCTCGAACCAGGACGGCAACACCTCCCTCTGGGTCATCGACATTCCGGGTGGAGCTCGCCGGCGGGTGGAGGTGCGGGAAAGAAACTACCTGCGGCCGACCGGCCGGCTGAAGATCTCGGTCGTCGACGCCGCGAGCGGGCGGACAGTGCCGGCGCGCCTCTCGGTGACCGGTCCGGACGGTCGCAGCTTCGCCCCCGACGACGCCTGGCGCCACGCCGACGAGGCGTTCGATCGCCGGGAGCGCCGTTTCGAGTACAGCTATTTCCATACGTCCGGCGCTTCCGAGGTGGTGGTGCCCGCGGGACCGATCGCGATCGAGGCGATGCGCGGACTGGAGCGCCGTGTCGTCACGAAGAGGTTCAGCGTGGCGCCGGGGGCCGTCGTGCCGGTGCGCATCGCCTTCGAGCGGATCGCCGATCTGCCGTCCAGGGGGTGGTGGAGCGGCGACCTGCACGTGCACATGAACTACGGCGGCGTCTACCGCAACACCCCGAAGCACCTGGCGTTGCAGGCCGCCGCCGAGGACTTGGCGGTGATCGAAAACCTGGTGGTCAACAAGGAGCAGCGCGTTCCCGACATCGCCTACTTCACGGACCGGCCGGCCCCCCCCTGGACGGACGGCGCGCTGATCGTCACGGGCCAGGAGTATCACACGAGCTACTGGGGGCACACCGGGATCCTGGGCCCGCGCGACCATTTCCTGCTGCCTCCGTACGCCGCCTATGTCGACACCCCCGCCGCGAGTCTCTACCCCGACAACACCGCCGTGTTCGACATGGCCCACGAGCAGGGGGCGCTCACGGGCTACGTGCATCCCTTCGACGCAACGCCCGATCCGGCGAATACCGATCGGCCCCTCACCCACGATCTGCCGGTCGGAGCCGCGCTCGGGAAGGTCGACTACTTCGAGGTCGTCGGCTTCAGCAACCATCTGGTGACCTCCGGGATCTGGTACCGCCTGCTCGACTGCGGCTTCCGGTTGCCGGCCGGCGCCGGCACCGACGCCATGGCGAACTTCGCCTCACTGCGCGGGCCGGTCGGGATGAACCGCGTCTACGTGAGAACCGGAGTCCGGCCCGATCACGCCCGCTGGCTCGCGGGGATCCGCGCCGGCAGGACCTTCGCGACCAACGGACCGCTCCTGGAGTTCACGCTCGGCGGCAAGCAGATCGGCGACGAGCTGCGTCTGCCGGCGGCCAGCGCCGCGGTGCGGCTGACGGCCGTCCTGCGGTCGATCGTGCCGGTGGACCACCTGCAGGTGGTCGGCAACGGCGAGGTGGTGGCGGAACTGCCGCTGGGCGGCGACCGCACCTCCGCGTCGATCACGCGCGCCATCGCGATCACCAGAAGCGGCTGGTACGTCCTGCGGGCCTACGCCGACGGTCCCGCGCACCCCGTGATGGACATCTACCCGTACGCCACGACCAGCCCGATCTACGTCAGCGTCGGCGGCGCGCCCGTGAAGTCGCCGGAGGACGCCCGCTTCTTCGTCGCCTGGATCGATCGCCTCGAGAAGGGGGCGCGCGGCCACCGGGGGTGGAACAACGGCGCGGAGAAGGAGAGGGTGCTGGACGACATCGCCCGGGCACGGGCGATCTACCAGGAACAGGTCACGCCCTGA
PROTEIN sequence
Length: 852
MIERKKLRGLLAAVIAVAGAPAVSAPGPTGREIVLKQIDLPHHYYYREMYLPQATTGPGSVAWSPDGAEVVYSMQGSLWRQRLGTSVARQITDGPGYDYQPDWSTDGRFIAYASYRDDAVEIWLLDADNGTARPVTRNGAVNVEPRFSPDGRRLAFVSTVYNRRFHIHTVDLDASGAPGEVERLTEDHDSGLPRYYYGPFDHYISPSWSPDGKEVVFVSNRGRVWGTGGFWRMKASPGAEMREIRYEETNWRARPDWSPDGRRIVYSSYLGGQWHHLWLMTDEGGDVLPITYGDFDATSPRWSRDGRRIAYVSNQDGNTSLWVIDIPGGARRRVEVRERNYLRPTGRLKISVVDAASGRTVPARLSVTGPDGRSFAPDDAWRHADEAFDRRERRFEYSYFHTSGASEVVVPAGPIAIEAMRGLERRVVTKRFSVAPGAVVPVRIAFERIADLPSRGWWSGDLHVHMNYGGVYRNTPKHLALQAAAEDLAVIENLVVNKEQRVPDIAYFTDRPAPPWTDGALIVTGQEYHTSYWGHTGILGPRDHFLLPPYAAYVDTPAASLYPDNTAVFDMAHEQGALTGYVHPFDATPDPANTDRPLTHDLPVGAALGKVDYFEVVGFSNHLVTSGIWYRLLDCGFRLPAGAGTDAMANFASLRGPVGMNRVYVRTGVRPDHARWLAGIRAGRTFATNGPLLEFTLGGKQIGDELRLPAASAAVRLTAVLRSIVPVDHLQVVGNGEVVAELPLGGDRTSASITRAIAITRSGWYVLRAYADGPAHPVMDIYPYATTSPIYVSVGGAPVKSPEDARFFVAWIDRLEKGARGHRGWNNGAEKERVLDDIARARAIYQEQVTP*