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13_1_20cm_2_scaffold_6820_9

Organism: 13_1_20CM_2_Acidobacteria_68_7

partial RP 12 / 55 MC: 1 BSCG 11 / 51 ASCG 4 / 38 MC: 1
Location: comp(6875..8335)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74BZ1_GEOSL similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 488.0
  • Bit_score: 443
  • Evalue 2.70e-121
rpoN; RNA polymerase sigma-54 factor RpoN; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 483.0
  • Bit_score: 549
  • Evalue 6.50e-153
rpoN; RNA polymerase sigma-54 factor RpoN similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 488.0
  • Bit_score: 443
  • Evalue 7.80e-122

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Taxonomy

R_Acidobacteria_67_21 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1461
ATGGCGCTCGAGCAAAAACTGAATCTGCGCATGACGCAGAAGCTCATCATGACGCCGTCTCTGCAGCAGGCGATCAAGCTGCTGCAGATGACCAAGCTCGAGCTGCAGGAGGAGGTCACCCAGGAGCTCACCGAGAACCCGCTGCTCGAGGAGCTGCAGGAGGGGGCCACGGAGGCGGACAAGCCGGAGGGAGAGGACGGCCAGGTAGCCGAGGGCGCCGCGGCCGCGGACGCCGAGGTCCCCGACAAGGAGCCGGAGCGGGATTCCTTCGACGAGATCGACTACGAGTCCTACTTCCAGGATTACATGGACTTGAGCTACCGCCCGCAGGCGCCCGCGGAGGAGATCGAGACGCCGCCGCTCGAGAACATCCTGAGCAAGCCGCAAAGCCTCTCCGATCACCTGCTCTGGCAACTCGACATGAGCATCGTCCCGGCGGGGCAGAAGGAGATCGCCCGCGCCATCGTCGGCAACCTGGACGAGGATGGATATCTGAGGGTGGCTCTCGAGGACATCGCCGCCATGGGCCCCTGGTCGCTGGAGGACGTGGAGCACGCTCTGCACTTCGTCCAGGAATTCGACCCTCCGGGAGTCGGCGCGCGCGATCTCAAGGAGTGCCTGCTGATCCAGCTGTCGTTCCATGACATGGAGGGCACGCCGGCGGAGACCATGGTGAAGGAGCACATGGTTCTCCTGCAGGGGCGTCGGTTCAAGGATCTCGCGCACGAGCTGGGGTGCAGCCTCGAGGAAGTCATGCACTACGTCGACACCATCCGACACCTCGATCCGAAACCCGGCAAGAAGTACAACGCGGGCAGCAACAACTACGTGATCCCGGACGTCTACGTCCTGAAGGTCGACAAGGGGTACACCATCGTGCTCAATGAAGAGGGCCTCCCGCGTCTGCGCATCAGCCCCTTCTACCGCCGCATGATCGACCGGAACAACACCGACGTCACGCGGGAGACGCGGGAGTACGTGCGCGAGAAATTCCGGTCCGCCTTCCGGCTGATCAAGAGCCTGGAAGAGAGGCAGCGCACCATCTACAAGGTCGCCAAGAGCATCGTCAAGCACCAGCAGGGGTTCCTGGACCTGGGTTATGAGCACCTGCGGCCCCTCATCCTCAAGGACGTGGCGGACGACATCGGCATGCATGAATCGACCGTCAGCCGCGTGGTCAATCACAAGTACATGCACACGCCGCGCGGCCTGTTCGAGATGAAGTTCTTTTTCCACTCGAGCATCAGCTCCACGCAGGGGCAGGACGTCTCCTCCCTGACGGTCAAGGAGCGCATCAAGAAGGTGGTGGGGGAGGAGGACGCGCGGCGGCCCCTCTCCGACGCAGCCATCGTGCAGATCCTGAGCGACGACGGGCTGCGCATCGCGCGGCGCACCGTGGCCAAGTACCGCGAGGAGCTGCGTATCCCGTCGTCCAACGAAAGACGTCAGGGCTTCAGCTGA
PROTEIN sequence
Length: 487
MALEQKLNLRMTQKLIMTPSLQQAIKLLQMTKLELQEEVTQELTENPLLEELQEGATEADKPEGEDGQVAEGAAAADAEVPDKEPERDSFDEIDYESYFQDYMDLSYRPQAPAEEIETPPLENILSKPQSLSDHLLWQLDMSIVPAGQKEIARAIVGNLDEDGYLRVALEDIAAMGPWSLEDVEHALHFVQEFDPPGVGARDLKECLLIQLSFHDMEGTPAETMVKEHMVLLQGRRFKDLAHELGCSLEEVMHYVDTIRHLDPKPGKKYNAGSNNYVIPDVYVLKVDKGYTIVLNEEGLPRLRISPFYRRMIDRNNTDVTRETREYVREKFRSAFRLIKSLEERQRTIYKVAKSIVKHQQGFLDLGYEHLRPLILKDVADDIGMHESTVSRVVNHKYMHTPRGLFEMKFFFHSSISSTQGQDVSSLTVKERIKKVVGEEDARRPLSDAAIVQILSDDGLRIARRTVAKYREELRIPSSNERRQGFS*