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13_1_20cm_2_scaffold_2279_5

Organism: 13_1_20CM_2_Gemmatimonadetes_70_10

partial RP 20 / 55 BSCG 22 / 51 MC: 3 ASCG 8 / 38
Location: 2666..3229

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG7_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 165.0
  • Bit_score: 180
  • Evalue 2.20e-42
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 170.0
  • Bit_score: 240
  • Evalue 1.90e-60
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 173.0
  • Bit_score: 187
  • Evalue 3.90e-45

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 564
ATGGCCCCCGGGGTGGCGACACTGCGCAAGGATCCAGCATCGGCGGCGGCCGAGTCGGAAGCAGCGGACGTCGCCCTGGCGGCGAGCGGCGACGCGCGCGCCTTCGAACGGCTGTACCGGACCCACCTGGCCCGGGTCCACAGCCTGTGTCGGCGCATGATGGACGCGGATCAGGCGGACGACCTGACGCAGGACGTCTTCGTGCGCGCCTGGCAGAAGCTGGGGACGTTTCGCGGCGAGGCGGCGTTCGGCACGTGGCTGCACCGGCTCGCGGTGAACGTGATCCTTGGCCGCCGCAAGGCGCTGGCGGTGGAGCGGGGCCGACAGAGCAGCGAACCGGAGGCGCTCGACGACCTGACCGGGCCCGTGGAGACGCCGGGGATGACGATGGACTTCGAGCAGGCGATCGGCCGCCTGCCGGACGGCGCCAAGCAAGTGTTCCTGCTACACGACGTCGCGGGATACCGGCACGAAGAGATCGCCACGATGCTCGGCATCGTCGTGGGCACGTCGAAGTCGCAATTGCACCACGCGCGCATGGCGTTGCGGAGGCACCTGGACTGA
PROTEIN sequence
Length: 188
MAPGVATLRKDPASAAAESEAADVALAASGDARAFERLYRTHLARVHSLCRRMMDADQADDLTQDVFVRAWQKLGTFRGEAAFGTWLHRLAVNVILGRRKALAVERGRQSSEPEALDDLTGPVETPGMTMDFEQAIGRLPDGAKQVFLLHDVAGYRHEEIATMLGIVVGTSKSQLHHARMALRRHLD*