ggKbase home page

13_1_20cm_2_scaffold_2761_4

Organism: 13_1_20CM_2_Gemmatimonadetes_70_10

partial RP 20 / 55 BSCG 22 / 51 MC: 3 ASCG 8 / 38
Location: 3038..3487

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilin n=2 Tax=Pseudomonas syringae group RepID=F3DHS6_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 29.1
  • Coverage: 151.0
  • Bit_score: 60
  • Evalue 1.50e-06
Type IV pilin {ECO:0000313|EMBL:EGH03887.1}; TaxID=629258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas amygdali.;" source="Pseudo UNIPROT
DB: UniProtKB
  • Identity: 29.1
  • Coverage: 151.0
  • Bit_score: 60
  • Evalue 2.20e-06
pilin assembly protein similarity KEGG
DB: KEGG
  • Identity: 32.4
  • Coverage: 148.0
  • Bit_score: 62
  • Evalue 8.80e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas amygdali → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGCGCACACGCGGCTTCACGTTCATCGAAGTGCTCATCGTGATGGTGCTGATCGGCATCATCGCGGCGCTGGGGATTCCGCGCATTCGCGACGCGATTCAGAAGAACAACGTGCACGCGGCGCGCGCGGCGCTTGGCACGCTGGTGGCCAAGGCGCGCGCGGGGGCCGTGCAGCGCGGCTGCAAGTCCGCGATCCACTTCACGTCGGGATCCGGGGGCACGGTGTGGATCACGGCGTGCAAGGTCAGCAACTCGGCGCTGACGGATACGCTAGGCGGCATCGAGCAGCTGGCGGCGCGCTACAGCGTCACGCTCACGGCGGGAGCCGACTCCGTGACCTTCATGCCCAACGGGGTGAGTCCCGACAACGTGCTGACGCTGCTGAAGGTGACGGCGAGTGGCATCAGTGATTCCGTGATGATCAACCAGGTCGGCAAGGTGGTGCGCTGA
PROTEIN sequence
Length: 150
MRTRGFTFIEVLIVMVLIGIIAALGIPRIRDAIQKNNVHAARAALGTLVAKARAGAVQRGCKSAIHFTSGSGGTVWITACKVSNSALTDTLGGIEQLAARYSVTLTAGADSVTFMPNGVSPDNVLTLLKVTASGISDSVMINQVGKVVR*