ggKbase home page

13_1_20cm_2_scaffold_90_13

Organism: 13_1_20CM_2_Gemmatimonadetes_70_10

partial RP 20 / 55 BSCG 22 / 51 MC: 3 ASCG 8 / 38
Location: comp(12591..13271)

Top 3 Functional Annotations

Value Algorithm Source
Putative TonB protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A976_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 36.8
  • Coverage: 242.0
  • Bit_score: 138
  • Evalue 6.70e-30
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated UNIPROT
DB: UniProtKB
  • Identity: 49.6
  • Coverage: 232.0
  • Bit_score: 204
  • Evalue 1.40e-49
TonB family protein similarity KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 240.0
  • Bit_score: 132
  • Evalue 1.40e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 681
GTGTTTGACGTCCTGATCGAGTCCAAACAGAAGAGCCAGAAGAAGAAGATCTTCGGCGTCGGGGTCATCTCGCTCTTGCTCCACACGGTCATCGTGACGGGGGCGGTGATCGCCACGCTCACCGCGGGGCCCAGCGACACGTCCACGAAGGTGGACACGCAGATGGTGTTCCTGAACCAGCAGGAGCAGAAGCCGGATCAACCCCCGCCGCCACAGCTCGACATGCAGCTCAAAGGCTTCCAAACGGTCGTGGCCCCGACCGACATTCCCACCAATATCCCGCCGGTGAACCTGCAGGAGCATTTCGACCCGCGCGACTATTCGGGCGTCGGCGTCGAGGGGGGGGTCGCCACGGGGATCGTGCCCGGCTCCGACCAGGTGCTCTCCGTGGACGTGGTGCAGGAGAAGCCGGAGCTGCTGTCGCACCCGCCCCCGGCGTACCCGCCGCTGTTGCAGCAGGCGGGGATCGAGGGGCGCGTGATGGTGCAGGCGATCATCGACACGACCGGCCGGGTCGAGCCGAATTCGGCGCGCGTGGTCGAGAGCGCCAACCCCGGCTTCGATCAGCCGGCCAAGAACGTGGTCCTGCGGTCGCTGTTCCGGCCCGGCCGGGTGTACGGCCGCGCCGTGCGCGTGCTGGTCGCGATTCCGATCGACTTCAAGATCCAGCGCACCCGTTAA
PROTEIN sequence
Length: 227
VFDVLIESKQKSQKKKIFGVGVISLLLHTVIVTGAVIATLTAGPSDTSTKVDTQMVFLNQQEQKPDQPPPPQLDMQLKGFQTVVAPTDIPTNIPPVNLQEHFDPRDYSGVGVEGGVATGIVPGSDQVLSVDVVQEKPELLSHPPPAYPPLLQQAGIEGRVMVQAIIDTTGRVEPNSARVVESANPGFDQPAKNVVLRSLFRPGRVYGRAVRVLVAIPIDFKIQRTR*