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13_1_20cm_2_scaffold_2079_11

Organism: 13_1_20CM_2_Nitrospirae_62_14

partial RP 11 / 55 BSCG 10 / 51 ASCG 8 / 38
Location: comp(6031..7755)

Top 3 Functional Annotations

Value Algorithm Source
msbA; lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.-); K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 543.0
  • Bit_score: 871
  • Evalue 8.90e-250
msbA; lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.-) similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 559.0
  • Bit_score: 828
  • Evalue 1.30e-237
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PE77_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 559.0
  • Bit_score: 828
  • Evalue 4.60e-237
  • rbh

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Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1725
GTGAAATCTCTCCTGCGCGTTCTCAACTACCTCCGGCCGTATCGCCTCCTCGCGGTCACCACGCTCCTCTGCGCCATGGCGACCACGGCGCTTGAATTGGTGCCTCCGTGGTTGATCAAGATCGTCATTGATGATGTCATTCAAGCTCGTCGCCTTGCCCTGCTGCCGTGGGTGATTCTCGGCCTGGTGGTGGCCTACGGACTCAAGAATGTGTTCGCGTCTCTCCGGATTCGATTCAACAACACCCTGGAACAGCGGGTTGTGCATGATCTGCGGGACCAGGTGTTCGCCGCCCTCCAGCGGCTCTCCGTGAGTTACTTCGAGAACCGCTCCACCGGCGAGATCATGTCGAGGGTCAACAGCGATACGGAGCACGTCGAGCGCATCTTTATCGACGGCCTGGAGGGACTGCTCACCGCTTCACTCACCTTGGTCGGCATCACGATCATGTTGTTCACGTTGAGCTGGAAATTGGCGGTGCTGTCGCTGATTCCCGTCCCTGTCTTGGTCGTCTCCGCCATGATATTCACCAAACGGGTGCATGGCTACTATCACGCGATTCGCAGGAGCGCAGCCGAACTGAACGCCTACCTGCAAGACGCGTTGTCTGGAATCCGGGAGACGATTGGATTCAACCGACAGGGCTACGAGGGCGGCCGATTCAACGCGCTGAGCCGCCGATACAGCGAGAACAACCTCAAGGCCATGTACCTCTGGTCCCTCTACTCGCCTGGGATGATCCTGGTGGGCAGTCTGGGAACCGTGCTGATTCTCTGGTACGGGGTCGGGGAAGTGCTGCGAGGCGCCCTGACCGTGGGGGAGTTGGTGATGTTCCTCTCCTACCTTGCCCTGTTCTATGTCCCGATCAATCAGATCCACTCCGTGAACCACCTGTTGCAGCACGCCTTGGCGGCAAGCGAACGGGTGTTTGACGTGCTGGATACGACGCCGGAGGTCCAGGATCGGCCGGGTGCCGCCCGCCCGGCGGAGCGGCTGCACGGCGCGGTCCGGTTCGACCGCGTCTCCTTTCACTACCGTTCGGACGTGCCCATCCTGACCGGCGTCAGTCTGGACGTGAGTCCGGGAGAACGGATTGCGCTGGTCGGCCCCAGCGGAGCTGGCAAGAGCACGATGCTCAAGTTGCTCATGCGTTTCTACGACGTGCAGGGCGGCGCGATCACCATCGACGGCTACGACGTGCGGGATGTGCCGCTCGCCTTCCTGCGAAGCCAAATCGGCCTGGTCCAGCAAGAGCCCTTCTTATTCAACGGCACTGTGCGCGAGAACATCGCCTATGGGGATCTGGCGGCCGATCAGGCCCGGATCGAGGAAGTGGCGCAGGCGGCGCGCGCCCACGAGTTCATCGCCGAATTACCGGACGGGTATGAGACCTGGATCGGCGAGCGGGGCGTCAAGCTCTCGGTCGGGCAGAAGCAGCGGGTTTCCATCGCGCGGGTCTTGCTCAAGAATCCGCCGATCGTGATTTTTGATGAGGCGACGTCGAATATCGATACTGAAACCGAAGTCAAGATCCGTGAGGCGCTCAACTATCTCACCCAGGGCCGCACGACCTTTATCATCGCCCACCGGCTTTCGACGCTGCACTACGTGGACCGCATCGTGGTGGTGGACAAGGGCCGGATCGTCGAGGAGGGGCATCACGAGGAGCTGCTCAATCGAGGCGGCCTCTACGCCGGCCTGTATGACGCCCAATTCCAGCTGTAA
PROTEIN sequence
Length: 575
VKSLLRVLNYLRPYRLLAVTTLLCAMATTALELVPPWLIKIVIDDVIQARRLALLPWVILGLVVAYGLKNVFASLRIRFNNTLEQRVVHDLRDQVFAALQRLSVSYFENRSTGEIMSRVNSDTEHVERIFIDGLEGLLTASLTLVGITIMLFTLSWKLAVLSLIPVPVLVVSAMIFTKRVHGYYHAIRRSAAELNAYLQDALSGIRETIGFNRQGYEGGRFNALSRRYSENNLKAMYLWSLYSPGMILVGSLGTVLILWYGVGEVLRGALTVGELVMFLSYLALFYVPINQIHSVNHLLQHALAASERVFDVLDTTPEVQDRPGAARPAERLHGAVRFDRVSFHYRSDVPILTGVSLDVSPGERIALVGPSGAGKSTMLKLLMRFYDVQGGAITIDGYDVRDVPLAFLRSQIGLVQQEPFLFNGTVRENIAYGDLAADQARIEEVAQAARAHEFIAELPDGYETWIGERGVKLSVGQKQRVSIARVLLKNPPIVIFDEATSNIDTETEVKIREALNYLTQGRTTFIIAHRLSTLHYVDRIVVVDKGRIVEEGHHEELLNRGGLYAGLYDAQFQL*