ggKbase home page

13_1_40cm_3_scaffold_10330_5

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: comp(3316..4053)

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 type transporter n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2V1_GEODF similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 245.0
  • Bit_score: 263
  • Evalue 2.60e-67
ABC transporter; K09690 lipopolysaccharide transport system permease protein Tax=GWA2_RIF03_38_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.5
  • Coverage: 245.0
  • Bit_score: 287
  • Evalue 1.80e-74
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 245.0
  • Bit_score: 263
  • Evalue 5.60e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_RIF03_38_11_curated → RIF3 → Bacteria

Sequences

DNA sequence
Length: 738
TTGCTCACGTGGCGCGACATCACGATCAAGTACAAGCAGTCGGTCATGGGGTTTCTGTGGGCGATCCTCATGCCCCTCGTCATAGTCGGGGCGGGCGTGCTGGTGCGCGCCGGCGTCGCGTCCGTGTCGGGACGTCCACTCCTGATCGGTGACGTGGCCGCCGTCGCCTTGAAGGCCGTTCCCTGGGCGTTCGTCGTTTCAGGCATCCGGTTCGCCAGCAACAGTCTCGTCGGGAACTCCAACCTCCTCACGAAGATCTACCTCCCGAGAGAGATCTTCCCGCTCGCCTCGGTCGGTTCCCAGCTCATCGATTTCGCGGTGGCCACCGTGCCGTTGACGGCGCTCCTCGCCCTGGCGCGTGTCGGAATCTCGCTGCAACTGGTCTGGGTGCCTCTCCTTATCGCCCTCCTCGTGGTCCAGGTCGCCGCCCTCGGCACGCTGCTGTCGGCCGGCAGCGTCTTTTTCCGCGACGTCAAATACGTCGTGGAAGTGGTGCTCACGTTCGCGATCTTCGTCACACCCGTGCTATTCGATGTCGACATGTTCGGCCGCTGGCGCACGCTGCTGCTGCTCAACCCCGTCGCTCCGCTGCTCGAAGGCCTGTCGGCGACGGTGATTCACCACCACCCACCCGAGCTCGGCTGGTTGGCCTACAGTGGCGCCGTCACCGTGTTCGCGGTCATCCTCGCGCTGGCGTTGTTCCGGCGCCTCGAACCCTACTTTGCCGAGACCATCTGA
PROTEIN sequence
Length: 246
LLTWRDITIKYKQSVMGFLWAILMPLVIVGAGVLVRAGVASVSGRPLLIGDVAAVALKAVPWAFVVSGIRFASNSLVGNSNLLTKIYLPREIFPLASVGSQLIDFAVATVPLTALLALARVGISLQLVWVPLLIALLVVQVAALGTLLSAGSVFFRDVKYVVEVVLTFAIFVTPVLFDVDMFGRWRTLLLLNPVAPLLEGLSATVIHHHPPELGWLAYSGAVTVFAVILALALFRRLEPYFAETI*