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13_1_40cm_3_scaffold_2149_23

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: comp(25527..26537)

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 348.0
  • Bit_score: 492
  • Evalue 5.00e-136
DNA-directed RNA polymerase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 353.0
  • Bit_score: 404
  • Evalue 9.80e-110
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 354.0
  • Bit_score: 415
  • Evalue 1.60e-113

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1011
GTGATTACGACTCTTGATTTGACGGGGTTGGTCCGGCCGCATCTGGTCGAAATGACCAAGCGCGAGGACAACCCGAATTCCGCCGAGTTCCGGCTCCAGCCGCTGGAGCGGGGCTACGGCTATACGTTGGGCAATTCGCTGCGCCGGCTGCTGCTCTCCTCGCTGCGTGGCGCCGCGGTCTGGGCGTTCCGCATCGACGGGGTGGTCCACGAGCATCAGACGATCCCGGGCGTCGTCGAGGACGTGCATCAGATCATCCAGCGCCTGAAGCAGCTGACGCTCGTGCTCGCGCCTGAGGTGGACGAGGCCGTACTGCGCTTCAAGGTGGAGAAGGCAGGTCCCGTGTACGCGCGCGACCTCGAACAGCATGGCTCGGTGACGATCGTCAACCCCGACCAGCTGCTGTTCACTGTGCAGGACGACCGCGACATCTCGGGCGAGCTGTACGTGAACAAGGGCCGCGGCTACGTCGAGGCCGAGCAGCATCCGGTCGATCGCCGCGCCAACTTCACGGTGGCGGAGACGCGCGTCGGCCAGCGCACCGACTACGATCGCCTGACGCTGACCGTCGAGACCAATGGCACGATCTCTCCCGAGGACGCGGTCGCGTACGCCGCCGCGCTCGCGCAGGAGCACTTCCGCTTCTTCGTCGATTTCGGCAAGGTGCCAATCGTTCCGGGCGAGCCCGCCGGCAATGGCGGGACCGAAGGCGGGCGGCTGCGAGACGTGCTGAGCCGCGCGATCGACGACGCTGGGCTGTCGGTGCGATCCGTGAATTCCCTCAAGAATTCCAACATCCGCACCCTGGGCGATCTCGTCCGCTACAAGGAAGACGATCTGCTGAAGGTGAAGAACGTGGGCGAGAAGGCGCTGGGGGAAATCGCGGAGCTGCTGCGCCGGGAGGGCCTGAACTTCGGGATGCAGCTCGAGGAGACGCCGGGCGGTGAGATTCGCGTCATCGATCCGGGCACCGCGCCGCAAGCGCAGCTGACGGGAACCGAGGAAGAGTAA
PROTEIN sequence
Length: 337
VITTLDLTGLVRPHLVEMTKREDNPNSAEFRLQPLERGYGYTLGNSLRRLLLSSLRGAAVWAFRIDGVVHEHQTIPGVVEDVHQIIQRLKQLTLVLAPEVDEAVLRFKVEKAGPVYARDLEQHGSVTIVNPDQLLFTVQDDRDISGELYVNKGRGYVEAEQHPVDRRANFTVAETRVGQRTDYDRLTLTVETNGTISPEDAVAYAAALAQEHFRFFVDFGKVPIVPGEPAGNGGTEGGRLRDVLSRAIDDAGLSVRSVNSLKNSNIRTLGDLVRYKEDDLLKVKNVGEKALGEIAELLRREGLNFGMQLEETPGGEIRVIDPGTAPQAQLTGTEEE*