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13_1_40cm_3_scaffold_7461_19

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: 14782..17130

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 494.0
  • Bit_score: 618
  • Evalue 1.00e-173
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Acidobacteria_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 479.0
  • Bit_score: 697
  • Evalue 2.40e-197
RNA polymerase sigma-54 factor, RpoN similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 487.0
  • Bit_score: 641
  • Evalue 3.10e-181

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Taxonomy

RBG_16_Acidobacteria_68_9_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 2349
GTGCTGGTCCTGCCTATCGGCGCGCTGTGGGGGGATTCGCCGGTCGCGTTTGCTCCTGATGTCCGGACGAGCCTGCCCCCCGACCGCGTGGCGGCCGAGCAGCATTTCCTCATGCTCGCCGAGGAAACCGTGGTGCGCAGCGAATCGGTCAGCGCGGAGCATCCCGTCGTAGGCGGCGGCAGTCGTCTCGAAGCGCGGCATCTCGTGAAGGCATACAAGGGCCGGCGCGTCGTGGACAACGTGTCGCTCGAGCTCGCCCAGGGCGAAATCGTCGGATTGCTGGGCCCCAACGGGGCAGGGAAGACCACGTCGTTCTACATGATTACCGGACTGATCCGCCCTGACGAAGGCCAGATTGTGCTCGACGGTCGCGAGTTCACGGCGCTCCCGATGTACCAGCGGGCCCGGTCGGGGATCGGCTACCTGGCGCAAGAGCCTTCGATTTTCCGCAAGTTGACCGTCGAAGAAAACGTACTCGCGATCCTCGAGACCTTGAACGTCGACGGCGAGGAACGCGCGCGGCGCCTCGAGTCGCTGCTCGATGAGCTGGCCATCAAGCACCTGCGCAAGCAGAAAGCCTACCAGCTGTCCGGCGGCGAGCGGCGTCGGCTCGAGATCACGCGCGCGCTGGTGACGGAGCCGAAGTTTCTGTTGCTCGACGAGCCGTTTGCCGGCGTAGACCCCATCGCGGTCAATGACATTCAAACCATTGTCGCCGGGCTGCGCCACCGCGGCATCGGCGTGCTCATCACCGACCACAACGTCGAGCAGACGCTCGATATCGTGGACCGCGCCTATATCATGTTCGAAGGGCGAGTCCAGGTCGCGGGCACGGTGCGGCAGCTCGTCTTCGACGACCGCGTCGCCTCGCTGTACCTCGGCCCCACGCTCACCACGCGTCTACGGGCGCGGCTGTCGCGCCAGGATTTGCGCATCAATCCGCGCCTGTACCAGGCGATGGATCTCCTGTACATGCCGCTGCTCGACCTCGAGCAGCATCTCAAACAGGAGCTGCTCGGCAACCCGTTCCTCGAGATGATCGAGCCGGAGGAAGAGGTTCAGGCGACGGCCGCCGAGCAGCAGCAAAACAAGCCCGAGAAGGAGGCCAAGGCCGAGGACGAGCCCGACTGGGAAAGCATCCTGCTCGAGGACCGCACCGAGCACGGTGTGCCGAGCGGCAGCTACAGCGATGCTCGCGAATACGTGGAGCCAGTCACGGTCGAGGGCAAGGACCTGATCGACTATCTGCGCGACCAGACGCGGATGCTCGACCTCAACCCGCGCCAACAGCTCCTCGCCGAGGAATTCCTCGGCAACATCGGGGAAGATGGCTATCTGCAGCACAGCCTCGAAGAGATCCTCAAGGGCGCGAACCAGCTGCTCGAAGAGCACGAGGCCGAGTCGGAGCTCGACCTGAATGTGCCGGCGTTCACGATCGCGGAAGTCGAAGCAATGCTGCACGTCATCCAGCAGCTCGATCCCCCGGGCATCGGCGCCCGCAACCTGCGCGAATGCCTGGTGCTGCAGCTCGAGAACCAGAAGCGCACCGACACGCTGGTCTACCGGCTCGTCAAGGAAGCCTTCGACGACCTGATCGCCCACCGCTGGAGCGATCTGGGCAAGCGTTTCGGGCTGGCGCCGGAGGAGGTACAGCGCGCCGCCGACGAGCTGGCGCGCCTCGATCCCAAGCCCGGCCTGCAGTATTCCGCCGCGAACGATGCCTACATCATTCCGGATCTCATCGTCGAGAAGATCGACGACAAGTACCACGTGTTTTTGAACGACAGCGGCCTGCCGCGGCTGCGGATTTCCAAGACCTACCAGGAAATCGCGCGCGATAAAAAGAAATACGACGGCGAGAGCAAGGAGTTCATCAACCAGCGCCTGAACAGCGCGCACTGGATGATCCAGGCCATCGAGCAGCGCCGCCAGACGATGCTCAAGGTCATGAACTTCATCGTGGACCGGCAGCGCGAATTCTTCGAGAAGGGCATCGACTATCTCAAGCCCCTCACGCTGCGCGAAGTCGCCGACGTCATCAGCATGCACGAGAGCACGGTGAGCCGCGTGACCAACGAAAAGTACGTCCAGACCCCACGCGGCCTGTTGCCCCTCAAGTTCTTCTTCTCGAGCGGCCTGAGTACCACGACGGGCGAGGACGCCAGCGCGCGGTCCATCAAGTCGCAGATCCAGAAGATGGTCGACGACGAGCCACCCAAGAATCCGCTCACCGATCAGCAAATCGTCGAGCTGTTCGATCGCAAAGGCGTCAAGATCGCCCGTCGCACCGTCGCCAAATACCGCGACCAGCTGGGCATTCTGCCCGCGCGCATGCGCAAGCGCCTATGA
PROTEIN sequence
Length: 783
VLVLPIGALWGDSPVAFAPDVRTSLPPDRVAAEQHFLMLAEETVVRSESVSAEHPVVGGGSRLEARHLVKAYKGRRVVDNVSLELAQGEIVGLLGPNGAGKTTSFYMITGLIRPDEGQIVLDGREFTALPMYQRARSGIGYLAQEPSIFRKLTVEENVLAILETLNVDGEERARRLESLLDELAIKHLRKQKAYQLSGGERRRLEITRALVTEPKFLLLDEPFAGVDPIAVNDIQTIVAGLRHRGIGVLITDHNVEQTLDIVDRAYIMFEGRVQVAGTVRQLVFDDRVASLYLGPTLTTRLRARLSRQDLRINPRLYQAMDLLYMPLLDLEQHLKQELLGNPFLEMIEPEEEVQATAAEQQQNKPEKEAKAEDEPDWESILLEDRTEHGVPSGSYSDAREYVEPVTVEGKDLIDYLRDQTRMLDLNPRQQLLAEEFLGNIGEDGYLQHSLEEILKGANQLLEEHEAESELDLNVPAFTIAEVEAMLHVIQQLDPPGIGARNLRECLVLQLENQKRTDTLVYRLVKEAFDDLIAHRWSDLGKRFGLAPEEVQRAADELARLDPKPGLQYSAANDAYIIPDLIVEKIDDKYHVFLNDSGLPRLRISKTYQEIARDKKKYDGESKEFINQRLNSAHWMIQAIEQRRQTMLKVMNFIVDRQREFFEKGIDYLKPLTLREVADVISMHESTVSRVTNEKYVQTPRGLLPLKFFFSSGLSTTTGEDASARSIKSQIQKMVDDEPPKNPLTDQQIVELFDRKGVKIARRTVAKYRDQLGILPARMRKRL*