ggKbase home page

13_1_40cm_3_scaffold_1459_5

Organism: 13_1_40CM_3_Actinobacteria_66_19

partial RP 10 / 55 BSCG 12 / 51 ASCG 6 / 38 MC: 1
Location: 5567..6175

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FF61_VERMA similarity UNIREF
DB: UNIREF100
  • Identity: 35.7
  • Coverage: 168.0
  • Bit_score: 96
  • Evalue 4.50e-17
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 35.7
  • Coverage: 168.0
  • Bit_score: 96
  • Evalue 1.30e-17
RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:AEB44966.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.7
  • Coverage: 168.0
  • Bit_score: 96
  • Evalue 6.30e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Verrucosispora maris → Verrucosispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGGCGGAGCCGATCTCGGCATCGAGCGCCGGTGAGGTGCGCGAAGCGCCAACCACATACGAAGCCGGCAACGAGGCGGACTTCGAACGACTCTATCAAGCGTCGTACGGCAAGATCCTCGGCACGTTGACCGCGATGCTCGGCGACCGGGCCGCGGCGGAGGATTGCGCCCAAGATGCATTCGAGCGCGCGTACAAGAAGTGGGCGAGCTGGCAGCCGATCGCGCCGGCCGAAGCCTGGGTACACAGGATCGCGATCAACGCCACGGTCTCGTACCAGCGCAAGATGCGGCTGCGCGAAGTCGGTGAGGTCATTCGCCGCCTGGGCCGGCCGGGCCTCGCGCCCGACCCCCAGGAGGTCGTGGAGCACCGTGACCTGGCCACCGCGCTGGCCAAGCTGCCGCCGAAGCAGGCGGCGGCGATCGTGCTCCGCCACTATCACGGGTACACGAACCGCGCGATCGCGCAGGCCTTGGGGATTCCGGAGCGGACCGTCGCCTCGAGGCTAGCCGTCGCGAAAGAGCGGCTCCGCGTGATGCTGAAGCACTCGTACGGACCGCAAGCAGACCTCGAGCCCGCCACCGAGCGTGGTTTCGCGGTAGCCGACTGA
PROTEIN sequence
Length: 203
MAEPISASSAGEVREAPTTYEAGNEADFERLYQASYGKILGTLTAMLGDRAAAEDCAQDAFERAYKKWASWQPIAPAEAWVHRIAINATVSYQRKMRLREVGEVIRRLGRPGLAPDPQEVVEHRDLATALAKLPPKQAAAIVLRHYHGYTNRAIAQALGIPERTVASRLAVAKERLRVMLKHSYGPQADLEPATERGFAVAD*