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13_1_40cm_3_scaffold_15513_1

Organism: 13_1_40CM_3_Actinobacteria_66_19

partial RP 10 / 55 BSCG 12 / 51 ASCG 6 / 38 MC: 1
Location: 488..1888

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraC n=1 Tax=Streptomyces sp. MspMP-M5 RepID=UPI0003801466 similarity UNIREF
DB: UNIREF100
  • Identity: 33.8
  • Coverage: 216.0
  • Bit_score: 112
  • Evalue 1.40e-21
Conjugal transfer protein TraC {ECO:0000313|EMBL:KDS88604.1}; TaxID=1906 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomy similarity UNIPROT
DB: UniProtKB
  • Identity: 32.2
  • Coverage: 214.0
  • Bit_score: 113
  • Evalue 8.80e-22
type IV secretory pathway VirB4 protein-like protein similarity KEGG
DB: KEGG
  • Identity: 33.8
  • Coverage: 216.0
  • Bit_score: 111
  • Evalue 6.70e-22

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Taxonomy

Streptomyces fradiae → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGCTCATCGCGAACATCGCGAACAGCGCGCCCGGACTCACCATACTCGAAACGTCTCCGATCGGCTTCGCGGGTGCTGCCGAGGACGATCGCCGCCGTTGGCTCATCTCGTTCCGCCGCATGCTCGACGGCCTCGACGCGCCGCTCCAGGTCGTGATCGACGTCGTGCCCGGCCCAGACCACGAAACCAACACGTCGCATCCGGTTCCGCGCGACCTCGACGACATGCGGGGCGCGGACATCGAGTTCGCGGCCGCCGTGAGGCGGTCCTCGACGGCTCACTCGACAACAACCCGACTTGTCATCGCGGAAAAATATGCGGCTCGTATACAGGCCGCGCTTACGGAAATCGGCATCAGCACCAACCCCGTCGCACCAATTGCCAACTTCGCCTTCGGCCGCGAGCTCGCGTCGCGATTCCAGCATGTCGGCGGCTTCAGCCGCAGCTGGTACATCGACCGTCTGCCCGGCACCGAGATCGAGCCGGGCTGGCTCTTCATGCTCTGTCCGCCGGGTCTGGCCGTCAGCCTCGCGTGGCACGCCGTTCCCCTGCCCGCTGCCTGGATCGTCCACTACCTGCAGCGTCAGCTGGTCAGCATGCGCGCCACCCGTCTGCTGGATGGCAACGCAGGCATCTCCGATCCGACGCTCGCCGGGGCGCTTCCGAACGCTGAGGACCTGCAACGCAGACTGGCCTCGAGCCAGGACAAAGCGTTCCACGTCGCGGTCTACCTGACCCTGACCTCGCCCACGGCCACCGACCTGGACATCGGCTCGCGCCGAATCGAGTCCGCCGGTCGCGCGATCCTGTGCGACCTCCAGCCCTGCACCTTCCGCATGCTCGATGGCTTTCTGGCCACGCGGCCCGGAGGAGCCGATCGGCTGCAGCGAAAACGCGTGCTCGACTCGACTGCTCTCACCACCTTCTTTCCCTGGTGGGAACCCGACCTGCAACAACCGAACGGACTTTTCATCGGCCGCGGCCGGGCCACCGGGGCCCCGGTCCTTGTCGATCCATTCGATCAGCGCCGGTACGCGAACGCCAACATCGGCATCTTCGGGGCGCCCTCGGCCGTGGTATCCAGGTCTACATCGTCGACCCCGAGCACGAGTACGGCCGCCTCGCGAGCGAGCTGGGAGGCGCCAACATCCAGCTGGCCCTCGGATCGGGACACGCGCTCAATGTCCTCGACCTGCGGCCGTCCGATCGTCGAGACGAAGCCTGGATCGGTCCCGCCGCGGCCGACGCGATTGATCTCTGCGCGTGTCTATGTGGCCGGCTCGATGAGTCCGAGCGTGCGCAGCTCGAGGCGGCCGTCCGCCTGGCGTACGACGAAGTCGCGCAGCCGGTCCTGCGTGACGTCGCCCAGCGCCTACCGCCGAAATCGCGAGTTGCGTTGA
PROTEIN sequence
Length: 467
MLIANIANSAPGLTILETSPIGFAGAAEDDRRRWLISFRRMLDGLDAPLQVVIDVVPGPDHETNTSHPVPRDLDDMRGADIEFAAAVRRSSTAHSTTTRLVIAEKYAARIQAALTEIGISTNPVAPIANFAFGRELASRFQHVGGFSRSWYIDRLPGTEIEPGWLFMLCPPGLAVSLAWHAVPLPAAWIVHYLQRQLVSMRATRLLDGNAGISDPTLAGALPNAEDLQRRLASSQDKAFHVAVYLTLTSPTATDLDIGSRRIESAGRAILCDLQPCTFRMLDGFLATRPGGADRLQRKRVLDSTALTTFFPWWEPDLQQPNGLFIGRGRATGAPVLVDPFDQRRYANANIGIFGAPSAVVSRSTSSTPSTSTAASRASWEAPTSSWPSDRDTRSMSSTCGRPIVETKPGSVPPRPTRLISARVYVAGSMSPSVRSSRRPSAWRTTKSRSRSCVTSPSAYRRNRELR*