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13_1_40cm_3_scaffold_2025_30

Organism: 13_1_40CM_3_Actinobacteria_66_19

partial RP 10 / 55 BSCG 12 / 51 ASCG 6 / 38 MC: 1
Location: 22140..22676

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PRC4_KRIFD similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 176.0
  • Bit_score: 215
  • Evalue 4.50e-53
putative RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 172.0
  • Bit_score: 222
  • Evalue 5.20e-55
putative ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 176.0
  • Bit_score: 215
  • Evalue 1.30e-53

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Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 537
ATGGCGCCACCTGACGTGCCCGAGGCCGACGACCGCCTTCGTCTGATTTTCACGTGCTGCCACCCGGCCCTGGCCCAGGAGGCGCAGGTCGCGCTCACTCTGCGCGCGGTCGCGGGCTTCACCACGCAGGAGATCGCCGCCGCGTTCCTTGTCTCCGAGCCGACCATGGCCCAGCGCATCGTGCGTGCCAAACGCAAGATCGTGGAGGCGAACATTCCATACCGGGTGCCGCAGGGCGCCGAGCTGGTGCCTCGCGTCGACGCCGTGCTCGCGGTTCTCTATCTGATGTTCAACGAGGGGTACCTGAGTCGCGGGCCGCAGGTGGCGTCACGACGCGACCTCGCGGAAGACGCGATGTGGCTGACCAGCCTGGTCGCGCGCCTGCTACCCGACCAGGCCGAAGTGCTCGGGCTGATCGTGCTGACGAGGCTGCACCTCGCGCGCTCACGCGCGCGATTCGACCGCAACGGCCAGATCGTGCTGCTGCCCGACCAGGACCGCGCCTTGTGGGACGCGTCGGCGATTGCGCAGGCGGTC
PROTEIN sequence
Length: 179
MAPPDVPEADDRLRLIFTCCHPALAQEAQVALTLRAVAGFTTQEIAAAFLVSEPTMAQRIVRAKRKIVEANIPYRVPQGAELVPRVDAVLAVLYLMFNEGYLSRGPQVASRRDLAEDAMWLTSLVARLLPDQAEVLGLIVLTRLHLARSRARFDRNGQIVLLPDQDRALWDASAIAQAV