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13_1_40cm_3_scaffold_460_4

Organism: 13_1_40CM_3_Actinobacteria_66_19

partial RP 10 / 55 BSCG 12 / 51 ASCG 6 / 38 MC: 1
Location: 3094..3708

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=6 Tax=Synechocystis sp. PCC 6803 RepID=SIGA_SYNY3 similarity UNIREF
DB: UNIREF100
  • Identity: 32.5
  • Coverage: 160.0
  • Bit_score: 90
  • Evalue 2.50e-15
rpoDI; RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 160.0
  • Bit_score: 90
  • Evalue 7.00e-16
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1147 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechocystis.;" source="Synechocystis sp. (strai similarity UNIPROT
DB: UniProtKB
  • Identity: 32.5
  • Coverage: 160.0
  • Bit_score: 90
  • Evalue 3.50e-15

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Taxonomy

Synechocystis sp. PCC 6714 → Synechocystis → Chroococcales → Oscillatoriophycideae → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGGGGGCGCAGCGCGTGCATTCCGATGGCGACGACGCCGTGATGCGAGATCTGCGTCAGCAAGTGCGGACCACCCCGCCGCTTCAGGCGGGCGAGCAGGAGAGGTTGCTCGCGCGAATCGCCCTCGGTGACCGAGCAAGCCAGGATCGCCTCGTCGCGACCAACCTCGCCATGGTGATCCGAATGGCGGAAGCTCGCCGGGAGCGAGGCCTTTCCGTTTCTGACCTCGTCTTGGAAGGATCTTTGGGTTTCCTCGAGGCCATGAACACGTTTGTTCAGAGCAAGAGCGCGGACTTCATCGCGTTCGCCGAACGCAAGGTCGGCGACCAGATGGACACCGCGATCGCCTCCGAGGCCGCCGCAGTCCGCGACGCGGAGCTGCTCGTCGCGGCCGCGACCGACTACGAGCGCACCGAGCTCTTACTCGCCAGGGTCCTGCGGCGTGCACCGATGGAAGCCGAGATCGCGGAAAAGCTCGAATGGACCGTCGAGCGCACCCGTTATGTGGCGCAGGTCGTCGCCGAAGCAAGGCGTCGCCATGACGAGGAGCTGCTCGCCTTCATCGACCCTGAGGCTCTCGACCCCGAAGCGTTCGACGACGCAGTTGACGGCTAG
PROTEIN sequence
Length: 205
MGAQRVHSDGDDAVMRDLRQQVRTTPPLQAGEQERLLARIALGDRASQDRLVATNLAMVIRMAEARRERGLSVSDLVLEGSLGFLEAMNTFVQSKSADFIAFAERKVGDQMDTAIASEAAAVRDAELLVAAATDYERTELLLARVLRRAPMEAEIAEKLEWTVERTRYVAQVVAEARRRHDEELLAFIDPEALDPEAFDDAVDG*