ggKbase home page

13_1_40cm_3_scaffold_5978_6

Organism: 13_1_40CM_3_Actinobacteria_66_19

partial RP 10 / 55 BSCG 12 / 51 ASCG 6 / 38 MC: 1
Location: comp(3966..4946)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F9R6_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 326.0
  • Bit_score: 401
  • Evalue 6.20e-109
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 62.3
  • Coverage: 326.0
  • Bit_score: 401
  • Evalue 1.70e-109
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADB51128.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.3
  • Coverage: 326.0
  • Bit_score: 401
  • Evalue 8.70e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Conexibacter woesei → Conexibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGGAGACCTCGACGCTCTCGGCTGCCCATTCGTTTGGCGACCTGGAGAGGTACCGCGGCGAGCTCACGGCGTACTGCTACCGGATGCTCGGGTCGCCCTTCGACGCCGAAGACGCGGTGCAGGATGCCTTTGTCCGCGCGTGGCGCAGCCGCGACAAGTTCGAGGGACGCTCGGCGATGCGGTCCTGGCTGTACCGGATCGCGACCAACGTCTGCTTGGACGTGCTCAAGGGCAAGGAGCGCCGCGAGCGGCCGATGGACATGGGCCCCTCGTGCGAACCGATCGAGGCCAACCTTCATGTCCCCGCTGAGGTCACATGGCTAGAGCCGATCCCGCTCAGCCTGATCGCGCCCGACCGCGATCCGGCGGATGTCGCCGTGGCCAACGAATCGATCCGCCTCGCGTTCGTGGCTGCGCTGCAGCAATTACCCGCCAAGCAACGGGCGGTGCTGATCCTCCGCGAGGTCCTGGACTGGCAGGCGACCGAGGTCGCGGAGCTCCTGGACACCTCAGTGCAGTCCGTCAACAGCGCCTTGCAGCGCGCGCGCGCGACGCTCGCCAAGGGCAACGCCGACGGCGCCACCCGCGCTCAGCCCCTGAGCGCCGCGGACCGCGCCATGCTGGAGCGGTACGTCGCCGCGTTCGAGGCGTACGACCTCAGCGCGTTGACCAGCTTGATCCGGGAAGACGCCAGGCAGTCCATGCCGCCCTACGACATGTGGCTGAGTGGCCGCGACGACATCCTCAAGTGGTGGTTTGGACCGGGCATTGGCTGCGAGGGATCGCGTGTCATCCCGACCATCAGTGCCAACGGCATGCCGACCTTCGGCCAGTACAAGCCGAGCCCGAACGGCGGCTTCGACCCGTGGGCCCTGCAGGTGCTCGACATCTCGGGAGGGCGGATCGGCGAGTTCACGTTCTTCCTCGACACGGCGAAGCTGTTCCCGCTATTCGGGCTGCCCCTGCACCTCGACGCCTAG
PROTEIN sequence
Length: 327
METSTLSAAHSFGDLERYRGELTAYCYRMLGSPFDAEDAVQDAFVRAWRSRDKFEGRSAMRSWLYRIATNVCLDVLKGKERRERPMDMGPSCEPIEANLHVPAEVTWLEPIPLSLIAPDRDPADVAVANESIRLAFVAALQQLPAKQRAVLILREVLDWQATEVAELLDTSVQSVNSALQRARATLAKGNADGATRAQPLSAADRAMLERYVAAFEAYDLSALTSLIREDARQSMPPYDMWLSGRDDILKWWFGPGIGCEGSRVIPTISANGMPTFGQYKPSPNGGFDPWALQVLDISGGRIGEFTFFLDTAKLFPLFGLPLHLDA*