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13_1_40cm_3_scaffold_9877_8

Organism: 13_1_40CM_3_Actinobacteria_66_19

partial RP 10 / 55 BSCG 12 / 51 ASCG 6 / 38 MC: 1
Location: 8024..8311

Top 3 Functional Annotations

Value Algorithm Source
Putative anti-sigma factor n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RH47_CLAMS similarity UNIREF
DB: UNIREF100
  • Identity: 44.9
  • Coverage: 98.0
  • Bit_score: 77
  • Evalue 6.00e-12
anti-sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 98.0
  • Bit_score: 76
  • Evalue 3.70e-12
Putative regulator {ECO:0000313|EMBL:CAQ02776.1}; TaxID=31964 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. sepedonicus ( similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 97.0
  • Bit_score: 76
  • Evalue 2.40e-11

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 288
TTGCTCTTCGAGACCGCACTTGGCGAGATCGGCAGCAACGTCCTCACGCATGGCCGGCCGGCAGGGACAGCGACGCCGATCGACTACGCGTTGCGACTCGACGAGGGAACCGTTGTCGCCTCGCTCAGCGATTCCGGCTCGCCGGCGCACGAGCACCTTTCACGCGAGATGCCGGGCCACGACAGCGAGGCGGGGCGGGGCCTGGCGATGGCACGCTCGCTTCTTGACGAGCTCGGCTATGAGCGGGACGGCGATGTCAACCGCTGGCGCCTGGTGAAGCGGCTGTGA
PROTEIN sequence
Length: 96
LLFETALGEIGSNVLTHGRPAGTATPIDYALRLDEGTVVASLSDSGSPAHEHLSREMPGHDSEAGRGLAMARSLLDELGYERDGDVNRWRLVKRL*