ggKbase home page

13_1_40cm_3_scaffold_4441_3

Organism: 13_1_40CM_3_Deltaproteobacteria_69_14

partial RP 19 / 55 MC: 1 BSCG 19 / 51 MC: 1 ASCG 6 / 38
Location: 2579..5734

Top 3 Functional Annotations

Value Algorithm Source
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=12556812 bin=CNBR_ACIDO species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 999.99
  • Bit_score: 1457
  • Evalue 0.0
  • rbh
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:ABK17147.1}; Flags: Precursor;; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Sy similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 999.99
  • Bit_score: 1281
  • Evalue 0.0
hydrophobe/amphiphile efflux-1 (HAE1) family protein similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 999.99
  • Bit_score: 1281
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Syntrophobacter fumaroxidans → Syntrophobacter → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3156
ATGGCTCGCTTCTTCATCAATCGCCCGATCGTGGCGATCGTCATCTCGATCATCACGGTCGTCGCGGGTCTCTTGGCGATGCGCAGCCTGCCGGTGGCGCAGTATCCGTCGATCATCCCTCCCCAGATCATCGTCAACGCCACCTTCACCGGCGCCGACGCGGTGACCGTCGAGCAGTCGGTGGCGACGCCGCTCGAGCAGCAGATGAACGGCGTGGACGACATGCTCTACATGCAGTCCACCAACGCCAATGACGGGACCATGGCGTTGACGGTGACGTTCGACATCGACACCGATCCCAACATCGATCAGGTCAACGTGACGAACCGGGTGGCGCAGGCGCAGCCCAACCTGCCTCCAGACGTCAATCAGTTCGGCCTCTCCTACCGGAAGTCGACCGGGCTGCCGATGCTGGTCATCTCGCTGTATTCGCCCCACCAGCGCTACGATGCGCTGTTCCTGGCCAACTACGCCAACATCAACATCAATGACGCGCTCTATCGCGTGCGCGGCGTGGGCGAGGTGCGTCTGTTCGGGGCGAGCGACTACGCGATGCGCATCTGGCTCAAGCCGGACGTGCTGGCCAAGCTCGGGCTCACCGTGCCGGATCTGGTGAGGGCGGTGTCGCAACAGAGCACGGTCAATCCGGCCGGCCGGGTGGGCGCGGATCCGGCGCCGCCCGGCAAGGAGATGACCTACACCGTCAGGGCGCAGGGGCGCCTGCAGACGGCGGAGGAGTTCGCGCAGATCGTCGTCCGCTCGAATGCCGACGGCTCCGTCGTACGCCTCTCCGACGTGGCCCGCATCGAGCTCGGCGCGCTGAACTACCAGCAGGTCTCGCGCGTCAACGGCCAGCCCGGCAGCCTGATCGCGGTGTTCCAGGCTCCCGGTTCGAACGCGCTCGATGTGGCCAACGGCGTGAAGGGCGTGATGGCGGAGCTCAAGCAACGATTCCCGCCGGACCTGGAATATGCCGTCACCCTCGACACCACGGCGCCAGTCACCGAGGGGATCACCGAGATCGCAAAGACGATCCTCGAGGCCATGGTGCTGGTCACGCTGGTGGTGTTCCTGTTCCTGCAGAACTGGCGCGCCACGGTGATCCCGATGATCGCCGTTCCGGTATCGTTGATCGGCACGTTTGCGATCTTTCCGTTGCTCGGCTTCTCCATCAACACCCTGTCCTTGTTCGGGCTGGTGCTCGCTATCGGGTTGGTCGTGGACGACGCGATCGTGGTGGTGGAGGCAGTGGAGCACCACATCGAGCAAGGAATGTCGCCGCGCGACGCCACCCTGCAGGCGATGAAGGAGGTCTCCGGACCCGTCGTGGGGATCGCGCTGGTGCTGTCGTCGGTGTTCGTGCCGATCGCCTTCGTGGGTGGCATCCAGGGGCGGCTCAACACCCAGTTCGCGGTGACCATCGCGATCTCGGTCCTCATCTCGGCATTCAACGCTCTGACGCTGTCGCCCGCGCTGTCGGCTTTGCTGCTCCGCCCGCGGCGCCCGGGCCGCGGGCCCCTGGCGCGCTTTTTCGCAATCTTCAACCGGGTGTTCGAGCGGGCCACGCAGGGCTACGTCAAGTGGAGCCATGGCCTGATCCGCAAGGCGTTCGTCGGCGTTGCCATCCTCGCCGGTTTCATCGTCGTCGACGGCGTCGTGGGTCGAAAGCTCCCCACCAGCTTCATCCCCGAGGAAGATCAGGGCTTCCTCTTCGCCAACGTGCAGCTCCCGGCCGCTGCCTCCCTGGAGCGCACCGATGCGGTGGCCAGGAAGGTCGAAAACGTCCTGGCCAAGACCGAGGGCGTGAAGGCCTTCAACAGCATCATCGGCTTCAGCCTGCTGACGCGGGTCTCGTCGACGTACAGCGCATTCATGTTCATCCAGCTCAAGCCGTGGAGCGAGCGCGAAGGGGCGGCGCTGGAAGCGCGCGGGATTCTGCGCAGCATCAACCGGGCCCTGGCGAGCGAGGTCCCGGAAGCGACGGCGTTCGCGTTCAGCCCCCCGGCGATCCCCGGGTTCGGCAGCGCCGGCGGCTTCTCCATGTGGCTGCAGGATCGCAGCGGCGGGTCGGTGGAGTTTCTCGATCAGAACGTCAAGGCGTTTCTCGACGCCGCGCGCAAGCGGCCGGAACTGACCGGGGTCAACTCGGTGTTCACCGCCGGGATCCCGCAGGTCTACGCCGATGTCGATCGGGAGAAGGTGCTCAACCAGGGGATCGCGATCGGCGACGTGTACCAGACGCTGCAGGCCTATCTGGGCGGCCTGTTCGTGAATCAATTCAATCGATTCGGCCGCCAATGGCGCGTGTTCCTGCAGGCGGAGGGTGAAGACCGCTTGACGGAGCAAGACATTGGTCAGTACTACGTGCGCAACAAGCAGGGAGACATGGTGCCGTTGTCCACGCTGACGAGCACCCGCCGGATCGCCGGGCCTGAGTACACCAACCGATTCAACCTGTACCGCGCGGCGCAGATCCTCGGCTCGGCCGCACCGGGATACAGCTCCGGGCAGGCGCTGGCCGCCCTCGAGGAAGTGGCGGCGCAGGTCCTCCCGCGCGAGATGGGGTATGGATTCGCCGACCTTTCCTATCAGGAGAAGAAGGCGTCCGGCAGGGCGGCGGCGATCTTTGCCTTGTCGTTGGGATTCGTGTTCCTGATCCTCGCGGCGCTCTACGAGAGCTGGTCCCTGCCGTTCTCGGTGCTCCTGTCGGTGCCGGTTGCAGTCCTCGGGGCCTTTCTCGGCCTCTTGCTGCGCAACTTCGACCTGGGGATCTTCGCCCAGATCGGTTTGGCGATGCTCATCGGCCTCGCGGCCAAGAACGCCATCCTCATCGTGGAGTTCGCGCGCGACGAGATGAAGAAGGGCCGGCCGCTGGTCGAGGCAGCGCTCGAGGGAGCGCGGCTGCGCCTGCGCCCGATCCTCATGACGTCGTTCGCGTTCATCTTCGGCATGATCCCGCTCTGGGTGGCGACGGGAGCGGGCGCGATCGCCCGGCAGATCCTCGGCACGGTGGTCATCACCGGCATGCTGGCGGCGACGGCGATCGCGATCTTCATCATCCCCGTGCTGTTCGTGCTGGTGGAGAGGTTCGCGAACCGGCGCGGGCATGCGGAACCGGCGGCGCAGCTTCCTACCGAGCCGGAGCCGGCGCCATGA
PROTEIN sequence
Length: 1052
MARFFINRPIVAIVISIITVVAGLLAMRSLPVAQYPSIIPPQIIVNATFTGADAVTVEQSVATPLEQQMNGVDDMLYMQSTNANDGTMALTVTFDIDTDPNIDQVNVTNRVAQAQPNLPPDVNQFGLSYRKSTGLPMLVISLYSPHQRYDALFLANYANININDALYRVRGVGEVRLFGASDYAMRIWLKPDVLAKLGLTVPDLVRAVSQQSTVNPAGRVGADPAPPGKEMTYTVRAQGRLQTAEEFAQIVVRSNADGSVVRLSDVARIELGALNYQQVSRVNGQPGSLIAVFQAPGSNALDVANGVKGVMAELKQRFPPDLEYAVTLDTTAPVTEGITEIAKTILEAMVLVTLVVFLFLQNWRATVIPMIAVPVSLIGTFAIFPLLGFSINTLSLFGLVLAIGLVVDDAIVVVEAVEHHIEQGMSPRDATLQAMKEVSGPVVGIALVLSSVFVPIAFVGGIQGRLNTQFAVTIAISVLISAFNALTLSPALSALLLRPRRPGRGPLARFFAIFNRVFERATQGYVKWSHGLIRKAFVGVAILAGFIVVDGVVGRKLPTSFIPEEDQGFLFANVQLPAAASLERTDAVARKVENVLAKTEGVKAFNSIIGFSLLTRVSSTYSAFMFIQLKPWSEREGAALEARGILRSINRALASEVPEATAFAFSPPAIPGFGSAGGFSMWLQDRSGGSVEFLDQNVKAFLDAARKRPELTGVNSVFTAGIPQVYADVDREKVLNQGIAIGDVYQTLQAYLGGLFVNQFNRFGRQWRVFLQAEGEDRLTEQDIGQYYVRNKQGDMVPLSTLTSTRRIAGPEYTNRFNLYRAAQILGSAAPGYSSGQALAALEEVAAQVLPREMGYGFADLSYQEKKASGRAAAIFALSLGFVFLILAALYESWSLPFSVLLSVPVAVLGAFLGLLLRNFDLGIFAQIGLAMLIGLAAKNAILIVEFARDEMKKGRPLVEAALEGARLRLRPILMTSFAFIFGMIPLWVATGAGAIARQILGTVVITGMLAATAIAIFIIPVLFVLVERFANRRGHAEPAAQLPTEPEPAP*