ggKbase home page

13_1_40cm_3_scaffold_1593_27

Organism: 13_1_40CM_3_Acidobacteria_56_11

near complete RP 41 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 12 / 38
Location: comp(25281..26357)

Top 3 Functional Annotations

Value Algorithm Source
pili retraction protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 357.0
  • Bit_score: 582
  • Evalue 3.90e-163
Twitching motility protein id=1955171 bin=GWB2_Nitrospirae_rel_47_37 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 357.0
  • Bit_score: 552
  • Evalue 2.40e-154
  • rbh
pili retraction protein similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 357.0
  • Bit_score: 542
  • Evalue 9.10e-152

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Nitrospinae_39_10 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 1077
ATGGCCAAGATCGACGCTTTTTTCAACCTAATGGATGAGGTTGGCGCATCAGACCTGCATTTGGCATCGGGATCTCAACCTATCTTGCGAGTCCGCGGCGAGTTGGAACGCGTGAAGTTTCCACCGCTTGAAAACGATGAGCTAAAGTCGATGCTGTATGAAATAGCGCCGGACTTCAAAGTCAAAATCTTCGAGGAGACCGGAGATGTCGACTTCGGTTATGAAATCCCGGGCAAAGCACGATACCGCGCTAACTTTTTCAACCAGAAATATGGCGTCGCCGCCGTGTTCCGGCAAATTCCGACGAAAATACTTACGGCGGAGCAGCTCGGCCTTCCTCCTATCTTGAAAAAATTCGCAATGTTAAATAAGGGCCTGGTGCTGGTTACCGGACCAACCGGTAGCGGAAAGTCAACGACTCTGGCTGCAATCGTCGATCATGCCAACAAAACACGCCGGGATCACATTATCACTGTGGAAGACCCAATCGAGTTTGTCCACTCGAGCCAACACTGCCTTGTCAATCACCGGGAAGTCGGAATGCATACGAAATCCTTCGCCGCTGCGCTTCGGGGCGCACTGCGCGAAGATCCCGACGTCATTCTGGTGGGAGAAATGCGCGACTTGGAGACGATCGAGCTGGCGCTCACGGCAGCCGCGACAGGTCACCTCGTGTTTGGGACCTTACACACGCCAAGCGCGGCGAAAACGATCGACCGCGTCATCGACGTGTTTCCGGCGGCACAGCAGAACCAAATCCGAAACACACTCTCGGAAGCTCTGAAGGGTGTGGTCGCGCAGAATCTTTTCAAACGCATCGATGTCAAAGGCCGGGTCTGTGCGTTGGAGATTCTGGTCGTCACTCCCGCCATTGCCAACCTGATCCGGGAGGCGAAGACATTTCAGATTCCAGGCATGCTGCAAGTTGGTAAGAAATACGGGATGCAGACGCTCGACGACGCCATCATGGACTTGCTGAATAAAAAAATGATCAGCCCGGAAGATGCTTACAACCGCTGCCTTGATAAGAATAAATTTCGGCCGCTGCTCAAGAATCCGCCCGAAGACTGGGAATAG
PROTEIN sequence
Length: 359
MAKIDAFFNLMDEVGASDLHLASGSQPILRVRGELERVKFPPLENDELKSMLYEIAPDFKVKIFEETGDVDFGYEIPGKARYRANFFNQKYGVAAVFRQIPTKILTAEQLGLPPILKKFAMLNKGLVLVTGPTGSGKSTTLAAIVDHANKTRRDHIITVEDPIEFVHSSQHCLVNHREVGMHTKSFAAALRGALREDPDVILVGEMRDLETIELALTAAATGHLVFGTLHTPSAAKTIDRVIDVFPAAQQNQIRNTLSEALKGVVAQNLFKRIDVKGRVCALEILVVTPAIANLIREAKTFQIPGMLQVGKKYGMQTLDDAIMDLLNKKMISPEDAYNRCLDKNKFRPLLKNPPEDWE*