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13_1_40cm_3_scaffold_8983_16

Organism: 13_1_40CM_3_Acidobacteria_56_11

near complete RP 41 / 55 MC: 4 BSCG 42 / 51 MC: 2 ASCG 12 / 38
Location: comp(12668..13126)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1381396 species="Bacteria; environmental samples.;" source="uncultured marine bacterium PPT_M1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 151.0
  • Bit_score: 240
  • Evalue 1.20e-60
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR id=12554183 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 153.0
  • Bit_score: 233
  • Evalue 1.80e-58
transcriptional regulator NrdR similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 150.0
  • Bit_score: 230
  • Evalue 2.50e-58

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Taxonomy

uncultured marine bacterium PPT_M1 → Bacteria

Sequences

DNA sequence
Length: 459
ATGAAATGTCCGTTCTGCGGCCATCTTCAGGATAAAGTCGTCGATTCCCGCGAGAGCAAGGAAGGCGACGCGATTCGCCGTCGTCGGCAATGCCTCGCATGCCAGCGGCGCTTCACCAGTTACGAGCGCATCGACGAAATACCCTATATGGCCGTCAAGAAGGATGGGCGCCGAGAGCGATTCGACAGGCAAAAAGTTCTGGCTGGTTTGCTGAAGGCGTGCGAAAAACGGCCGGTTTCAATGATTCAACTCGAAACGATCGCGGACAAAGCCGAAGCGATGGTCCAGGAATCGAGCGAACGAGAGGTCACTACCCGGAGCGTTGGTGAGATGATTATGAATGAACTGAAGAATCTCGATAAAGTCGCGTACGTTCGATTCGCGTCCGTCTACCTGGACTTCAAGGATGTCCAGGAATTCATGACGGAACTGAAAGATCTGCTGAAAAGCCGGGAATAG
PROTEIN sequence
Length: 153
MKCPFCGHLQDKVVDSRESKEGDAIRRRRQCLACQRRFTSYERIDEIPYMAVKKDGRRERFDRQKVLAGLLKACEKRPVSMIQLETIADKAEAMVQESSEREVTTRSVGEMIMNELKNLDKVAYVRFASVYLDFKDVQEFMTELKDLLKSRE*