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13_1_40cm_3_scaffold_1432_5

Organism: 13_1_40CM_3_Crenarchaeota_52_10

partial RP 26 / 55 MC: 1 BSCG 8 / 51 ASCG 27 / 38
Location: comp(3661..4479)

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp42 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AH19_PYRYC similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 266.0
  • Bit_score: 278
  • Evalue 8.60e-72
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 Tax=RBG_16_Archaea_50_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 271.0
  • Bit_score: 337
  • Evalue 1.70e-89
exosome complex RNA-binding protein Rrp42 similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 266.0
  • Bit_score: 278
  • Evalue 2.40e-72

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Taxonomy

RBG_16_Archaea_50_20_curated → Archaea

Sequences

DNA sequence
Length: 819
GTGTCATTCACTCCCCAGCTCCCGCCAGTCGCGAAGCTCGAACAAAAGACTGTTATTGATCTTGTGGCAAACGGAAAGAGGATGGACGATAGAACCGCAGACAGCTATCGACCATTACAGATACAAGTGGGTTTGATAGAGAAAGCAAACGGCTCAGCCCAAGTATACCTCGGCAAATCGAAAGTTCTCGTGGGCGTCAAAGTAGAAACGGGAACTCCCTTCCCCGACACTCCGGACGAGGGAGTCCTGACTGTAAACGCCGAACTCGGTCCCCTAGCATCTCCTTTATTCGAAACAGGACCGCCAAGCGAGCAAGCTATCGAACTAGCACGCGTGATCGACAGGGGAATCAGAGAGTCCAAGGCCGTGGACATGAAATCGCTGGTCCTCTTGAAGGGAAAGAAAGTCCAGGTAGTATTCGTCGACATTTACATCCTGGATCATGACGGCAACCTCATAGATGCAGCGTCCATAGGCGCACTAGCCGCCCTTGCAAGCGCCAAGCTGTTGAAGGCTGAGCTCAAGGGAGACGAGGTCGTATACAAGCCGGGACTCCATCCTCTACCTCTCAATAACCACCCTGTTGCCGTCACCTTCGCCAAGGTCGGCAAAACAATCGTCGTAGACCCTGTCCTAGAGGAGGAGCAAGTCATGAACGCAAGGCTGACAGTCACGATTGAGAAGAACGGAAACATCTGCGCGATGCAAAAAGGAGGTCTATCAGGCTTCACCCAAGACGAACTGAAGACGATAGTGCACTTGGCAGTGCAGAAGGCTGCCGAGAACAGAGCAAAGATATTGGCCGCGGCGAAGGGCTGA
PROTEIN sequence
Length: 273
VSFTPQLPPVAKLEQKTVIDLVANGKRMDDRTADSYRPLQIQVGLIEKANGSAQVYLGKSKVLVGVKVETGTPFPDTPDEGVLTVNAELGPLASPLFETGPPSEQAIELARVIDRGIRESKAVDMKSLVLLKGKKVQVVFVDIYILDHDGNLIDAASIGALAALASAKLLKAELKGDEVVYKPGLHPLPLNNHPVAVTFAKVGKTIVVDPVLEEEQVMNARLTVTIEKNGNICAMQKGGLSGFTQDELKTIVHLAVQKAAENRAKILAAAKG*