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13_1_40cm_3_scaffold_2411_27

Organism: 13_1_40CM_3_Crenarchaeota_52_10

partial RP 26 / 55 MC: 1 BSCG 8 / 51 ASCG 27 / 38
Location: 23985..24563

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=RL6_THEKO similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 176.0
  • Bit_score: 179
  • Evalue 2.90e-42
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 173.0
  • Bit_score: 199
  • Evalue 5.00e-48
rpl6p; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 176.0
  • Bit_score: 179
  • Evalue 8.30e-43

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Taxonomy

uncultured archaeon → Archaea

Sequences

DNA sequence
Length: 579
ATGGCGCGTTTCGAAACCCTTCAACGCACGATCCAGGTCCCCGACGGCGTCACTGTCCAAGTCGAGGGGAAAACGGTGAAGGTTAAAGGCCCGCTCGGAACGCTCCAAGAGGACTTGTCGCACTTGCCGGTTACCTTCACCCAGAGCGGTAGAGAGGTCCAGGTCTCAGTCACCTGGCCTCGTAAACGAGAGATCGGAATGCTAGGCACGGCCGCGGCCCATATTCGGAATATGATCAGAGGCGTAACCAAGGGCTACAGGTACAATCTTAGAACCGTGTACGCTCACTTCCCAGTCACCGTAAAGGTCGACGAAAAAGCTAGAGAACTCAAAGTAGAAAACTTCACAGGCGAAAAGACACCTAGATCCGCCCAGATACTTGATGGCGTGAAAGTCGCTGTGAAAGGCGACGATATCACGGTCGAGGGAATAGACATCAAAGCTGTAAGCCAAACAGCGGCCAACATTCAGAACTCGACAAAGATCAAGAAGAAAGATCTCCGCGTCTTCCTTGACGGCATTTACGTAGACACGAAGACCAGTCTCGAGACACCTGCCGGGCCGGCGAAAGTGAAGTAG
PROTEIN sequence
Length: 193
MARFETLQRTIQVPDGVTVQVEGKTVKVKGPLGTLQEDLSHLPVTFTQSGREVQVSVTWPRKREIGMLGTAAAHIRNMIRGVTKGYRYNLRTVYAHFPVTVKVDEKARELKVENFTGEKTPRSAQILDGVKVAVKGDDITVEGIDIKAVSQTAANIQNSTKIKKKDLRVFLDGIYVDTKTSLETPAGPAKVK*