ggKbase home page

13_1_40cm_3_scaffold_928_1

Organism: 13_1_40CM_3_Crenarchaeota_52_10

partial RP 26 / 55 MC: 1 BSCG 8 / 51 ASCG 27 / 38
Location: comp(1..1179)

Top 3 Functional Annotations

Value Algorithm Source
Putative ski2-type helicase n=2 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=HELS_THEKO similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 390.0
  • Bit_score: 339
  • Evalue 3.50e-90
DEAD/DEAH box helicase domain-containing protein Tax=RBG_16_Archaea_50_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 357.0
  • Bit_score: 440
  • Evalue 2.00e-120
RNA helicase Ski2-like protein similarity KEGG
DB: KEGG
  • Identity: 45.4
  • Coverage: 390.0
  • Bit_score: 338
  • Evalue 2.90e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Archaea_50_20_curated → Archaea

Sequences

DNA sequence
Length: 1179
GTGAAGATTAGCGACCTCCCCATCGACGGACAAGTAATCGACTTATTGGCAGAGCAAGGTCTCGACGAGCTCTACCCACCACAACAACACGCAATCGAAGCAGGAGTCCTAGATGGGAAGAACCTTGTTCTCGCCAGTCCTACCGCCAGCGGAAAGACCCTAGTCGCAGAACTCTGCATACTTCAACACGTCCTCGAACACCGAGGCAAGGCAATCTACTTGGCCCCACTACGCGCCCTGGCTAGCGAGAAATTCAAGGAATTCCAACGATACTCAGCAATCAAGAAACCCAACGGGGAACACGTCAGAGCTGGAATATCCACAGGAGACTACGACAGCTCAGACCCATGGCTAGGAAGATACGACATCATACTCTGCACTAACGAAAAGGCAGACTCTCTCTTGAGGCACAAGGCTCCCTGGATGAGCGAACTCACCCTCGTCGTTGCAGACGAGGTTCATCTTCTAACTGAACAAGAAAGGGGTCCAACCCTCGAAGTGGTTCTAACTCGACTCACAGAGATCAACCCGAACATCCAGGTCTTAGCTCTCAGTGCAACGGTGAGAAACGCGGAAGAGGTAGGATCCTGGTTAAAAGCCGGATCGGTGACAACCGACTGGCGCCCCGTCCCGCTAAGAGAAGGAATCTATCATGATAACCAAGTGCAGTTTCGCGATGGTGCGAGCCGAGCAATTCTAAGCGGAACCAAAACGCCAAGTCTTGACATTGCCCTCGACGTGTTGAGCACCGGCGGCCAAGCACTGATTTTCACTGAGACCCGTCGGTCAGCAGTCGAGATGGGACGGAAGGCCTCGGTGGCGGTGAAGAGCCGCCTGTCGAAGCTCGAAGACAGGGCGCTGAACACTATTGCTGAGCGAATACTCTCGACTGGCGAGAAGACACGGCTAAGCGAAGCCCTCGCGATGCAGGTTGCGGGAGGCGCTGGCTTTCATCATGCAGGTCTAACGGGAATTCATCGAGGAATAGTCGAAGACGCCTTTCGAGAAGGCAGAATCAAGGTCCTGGCCGCGACCCCGACGCTTTGCTTACCTGCAGGCGAGGAGATTTTTGGGAATCCAGCCCCTATTGCAATAGAGAAGCTTTCCAGGCGCGACAGAGTCTTGACTCACGGGAATGTATTCGAGCATGTCATAGCACCGACTTCCAGATGGTATGAC
PROTEIN sequence
Length: 393
VKISDLPIDGQVIDLLAEQGLDELYPPQQHAIEAGVLDGKNLVLASPTASGKTLVAELCILQHVLEHRGKAIYLAPLRALASEKFKEFQRYSAIKKPNGEHVRAGISTGDYDSSDPWLGRYDIILCTNEKADSLLRHKAPWMSELTLVVADEVHLLTEQERGPTLEVVLTRLTEINPNIQVLALSATVRNAEEVGSWLKAGSVTTDWRPVPLREGIYHDNQVQFRDGASRAILSGTKTPSLDIALDVLSTGGQALIFTETRRSAVEMGRKASVAVKSRLSKLEDRALNTIAERILSTGEKTRLSEALAMQVAGGAGFHHAGLTGIHRGIVEDAFREGRIKVLAATPTLCLPAGEEIFGNPAPIAIEKLSRRDRVLTHGNVFEHVIAPTSRWYD