ggKbase home page

13_1_40cm_3_scaffold_2594_10

Organism: 13_1_40CM_3_Nitrospirae_62_11

partial RP 31 / 55 BSCG 28 / 51 ASCG 8 / 38
Location: 4718..5254

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCW7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 178.0
  • Bit_score: 250
  • Evalue 1.60e-63
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 178.0
  • Bit_score: 250
  • Evalue 4.60e-64
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 178.0
  • Bit_score: 250
  • Evalue 2.30e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 537
ATGTCGCGGCTGGGGCGAAAGCTTATTCCGATTCCCGCGGGTGTTCAGGTCCAGGTGACCGATCGTGTGGTCTCGGTGAAGGGACCGCTCGGTCAGCTTGAATGGACACTGACCCCACACGTGTCCGTGGCGGTGACTGATGGCCGTGTACAGGTGAATCGCTCTGCCGACGATGCCAAAGTGAGAGCCCTGCACGGGCTCGTCTGGGCTGAACTCAGGAACATGATTGTGGGTGTGACCAAGGGATATGAGCACACGCTGGAGATGACCGGAGTCGGCTACAAGGCACAGGTCCAGGGGCGCGTGGTGAACCTGAATGTCGGGTATGCGCATCCGGTGGTGTTTGCGCTTCCTCCGGGGGTCGAGGCGAAAGTGGAGAAGCAGACGGTCATTACCATCCGCGGGATTGACAAGAGAACAGTCGGTCAGGCCACCGCGAATCTCCGTGGCATCAAGCCGCCGGATGTGTACAAACAGAAGGGCATCCGGTATGAAGGGGAAGTCCTGCGCAAGAAAGAAGGCAAGACCGGAAAGTAG
PROTEIN sequence
Length: 179
MSRLGRKLIPIPAGVQVQVTDRVVSVKGPLGQLEWTLTPHVSVAVTDGRVQVNRSADDAKVRALHGLVWAELRNMIVGVTKGYEHTLEMTGVGYKAQVQGRVVNLNVGYAHPVVFALPPGVEAKVEKQTVITIRGIDKRTVGQATANLRGIKPPDVYKQKGIRYEGEVLRKKEGKTGK*