ggKbase home page

13_1_40cm_3_scaffold_1315_12

Organism: 13_1_40CM_3_Euryarchaeota_66_7

partial RP 25 / 55 MC: 14 BSCG 10 / 51 MC: 1 ASCG 25 / 38 MC: 19
Location: comp(11252..11782)

Top 3 Functional Annotations

Value Algorithm Source
leuD2; 3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_c similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 166.0
  • Bit_score: 229
  • Evalue 3.20e-57
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit n=1 Tax=uncultured prokaryote RepID=H5S9Q6_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 161.0
  • Bit_score: 188
  • Evalue 7.60e-45
leuD; 3-isopropylmalate dehydratase small subunit LeuD similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 159.0
  • Bit_score: 181
  • Evalue 1.50e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Euryarchaeota_69_17_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 531
ATGAAGACCCGCTTCCACGGGCGCGTGTGGACGTTCGGGGACGACATCTCCACGGACCACATCATCGCGGGGAAGTACCTCGGGACGACGGACTCCAAGGTGTTCGCGGCACACGCGTTCGAGGCCGTGGACCCGACGTGGGCGAAAAAGGTTCAGCCTGGCGACCTCATCGTGGCGGGGGATAATTTCGGGTGCGGCTCGAGCCGCGAGCAGGCCCCCGTGGCTCTGAAGACCCTCGGGATTTCCGCAATCCTCGCGAACTCGTTCGCGCGCATCTTCTTCCGGAACGCGATTAACCTCGGGTTCCCGGTGCTCGAGTGCCCGGGGCTGAAGGCGAATGTGAAGGCGGGTGAGGTCGTCGATCTCGACATGGCTCGCGGGGAGATCCATCTCCCGGATGGGTCCGTGATGCGGTTCAAAGCCCTCCCGCCGAACGTCCTCGAGATTCTCGAGGCGGGCGGACTCGTGCCGAAGTTGAGGAAGGAGCTCGCGGCAAAGTCTAGGACACAAGTCGTTCAAGGGCCCCGCTAG
PROTEIN sequence
Length: 177
MKTRFHGRVWTFGDDISTDHIIAGKYLGTTDSKVFAAHAFEAVDPTWAKKVQPGDLIVAGDNFGCGSSREQAPVALKTLGISAILANSFARIFFRNAINLGFPVLECPGLKANVKAGEVVDLDMARGEIHLPDGSVMRFKALPPNVLEILEAGGLVPKLRKELAAKSRTQVVQGPR*