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13_1_40cm_3_scaffold_6487_6

Organism: 13_1_40CM_3_Euryarchaeota_66_7

partial RP 25 / 55 MC: 14 BSCG 10 / 51 MC: 1 ASCG 25 / 38 MC: 19
Location: comp(5229..5552)

Top 3 Functional Annotations

Value Algorithm Source
transcription termination factor Tfs (EC:2.7.7.6); K03057 transcription elongation factor Tax=RBG_16_Euryarchaeota_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 107.0
  • Bit_score: 213
  • Evalue 1.90e-52
rpoM; DNA-directed RNA polymerase subunit M (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 107.0
  • Bit_score: 123
  • Evalue 3.90e-26
DNA-directed RNA polymerase subunit M n=2 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=RPOM_METTH similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 108.0
  • Bit_score: 123
  • Evalue 1.80e-25

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Taxonomy

RBG_16_Euryarchaeota_68_12_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 324
ATGTTTTGTCCGAAGTGCGGCTCACTGATGTTCCCGAGCGACGGGAAGCTCGTGTGCGGGAGCGCGACGTGCGGGTTCTCGAAAGGGGTCTCGACGAAGGACGCCGCGAACGCGCGGACCGCGGTGAAGGTGAACCGGGACCGGCCCGCGGAGACCCTCGTCCTCGACGACGTCCTCGACACGCTCCCGAAGACGCGAGCGGAGTGCCCGAAGTGCGGGAACGGCGAGGCGTTCTGGGTGATGCGGCAGACGCGCGCCGCGGACGAGCCGACGACGCGGATCTACCGGTGCACGAAGTGTTCCCACACCTGGCGGGAGTACTGA
PROTEIN sequence
Length: 108
MFCPKCGSLMFPSDGKLVCGSATCGFSKGVSTKDAANARTAVKVNRDRPAETLVLDDVLDTLPKTRAECPKCGNGEAFWVMRQTRAADEPTTRIYRCTKCSHTWREY*