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13_1_40cm_3_scaffold_135_6

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: comp(4836..6428)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECD_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 551.0
  • Bit_score: 469
  • Evalue 5.10e-129
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 557.0
  • Bit_score: 582
  • Evalue 4.50e-163
SecD export membrane protein similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 559.0
  • Bit_score: 494
  • Evalue 4.20e-137

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1593
GTGATCCTGGGACTCGTGGCCGCGAGCGCGATCTCGCTCCTGCCCCGTCACGAGACGCAGCGGGTGCCGGACCCGGTGACCGGTCGCATGAAGGACACCACCGTGCGTCGGGTGCCGATCAACCTCGGCCTGGACCTGCGAGGGGGCGTGCACCTGGCGCTGGAAGTCGATCAGTCGAAGGGTCCGGTGCCCGACTGCGCCGACGCGATCCAGCGTGCCGAGCGGGTCGTGCGCACCCGCGTGGACGAGTTCGGCACCACGGAGCCCGTCGTGCAGATCGTCGGCCGCTGCCGGCTGATCGTGGAGCTGCCGGGCGAGAAGGACGTGAACCGCGCCAAGGGCATCGTACAGCGCACGGCGTTTCTCGAGTTCCGCATCACGGACATGAGGAACGTGTTCCGCGACGCCATCCCGGCGATTGACGTGGCGTTACGGGCCGCGGGCGTGCGCGGCCCCGCCGCCGGCCCGTCCAACGCGGTCGCCCGTCTGCTCGGCCAGGACACGACAAAGGCGACCGCCGGGGCCGACACCTCGAACCAGCGAGGCGCGCTCGGGTCACTGCTCTTCCAGGGTAGCCTGGCGGGCGAGTACCTGGTCCCTGAGGAGCAGTTTGAAGTGGCCGACAGCTTGATCAACCGCCCCGAGGTGAAGCGGCTGCTCCCGCGGGGCGTCGCGCTGTTCTGGGGCACGCAGCTGGTGCCGCAGGGGGCGCGCACCTACCACGCGCTGTACGCGGTCGAAGACCGGCCGATCATCACCGGCGAGTGCCTCACCAAGGCCCAGCCGCGGCGCGATCCGCTGACCAATCAATCCGTCGTGGCGTTCACGCTGACGCACCGCTGTGGGCGCATCTTCGGGGACGCCACCGCCCGGCACGTCGGCGACTACATGGCGATCATCCTCGACGGGCGGGTGCAGGGGCAGCCGCCGGTCATCAAGTCGGAGATCCGCAACGAGGGGCAGATCGAGCTCGGCTCGCGTCCGTTCGCCGACGCGCAGGACCTGGCGCTGGTGCTCCGCGCCGGCGCGCTCCCGGCGCCGCTCACGATCGTCGAAGAGCGCACGATCAGTTCCTCGCTCGGAGAGGATTCGATCAACGCGGGCATCAGGGCCGGAGTCGTGGGGATCATCCTCGTCGTGGTGATCATGGTGGGTTACTATCGTCTCTCCGGCGCGCTCGCGGTCGCGGCGCTGGCGCTCTACACCCTGCTCACCTTCGGTGGGCTCGCCGCCTTCGGGTTCACGCTGACGATGCCGGGGCTCGCGGGGTTCGTGCTCTCCGTCGGCATCGCGGTGGACGCCAACGTGCTGATCTTCGAGCGTATCCGCGAGGAGCTGCAGCACGGCAAGCTGGTGCGCACCGCGGTGGACGAGGGCTTCAAGCACGCCATGAGCGCCATCGTCGACTCCAACGTGTCGACCGCGCTCACCGCGTTCATCCTGTACCTCGTCGGCACCGGGCCGGTGCAGGGCTTTGCCATCACACTGATCATCGGCATCGCGGCCTCGATGGTGACGGCCGTCTACGTCGTGCGCACCTTCTACATGGTCTGGCTGCAGCGCCGGCCGGACCTCGTCACCCTGAGCGTCTGA
PROTEIN sequence
Length: 531
VILGLVAASAISLLPRHETQRVPDPVTGRMKDTTVRRVPINLGLDLRGGVHLALEVDQSKGPVPDCADAIQRAERVVRTRVDEFGTTEPVVQIVGRCRLIVELPGEKDVNRAKGIVQRTAFLEFRITDMRNVFRDAIPAIDVALRAAGVRGPAAGPSNAVARLLGQDTTKATAGADTSNQRGALGSLLFQGSLAGEYLVPEEQFEVADSLINRPEVKRLLPRGVALFWGTQLVPQGARTYHALYAVEDRPIITGECLTKAQPRRDPLTNQSVVAFTLTHRCGRIFGDATARHVGDYMAIILDGRVQGQPPVIKSEIRNEGQIELGSRPFADAQDLALVLRAGALPAPLTIVEERTISSSLGEDSINAGIRAGVVGIILVVVIMVGYYRLSGALAVAALALYTLLTFGGLAAFGFTLTMPGLAGFVLSVGIAVDANVLIFERIREELQHGKLVRTAVDEGFKHAMSAIVDSNVSTALTAFILYLVGTGPVQGFAITLIIGIAASMVTAVYVVRTFYMVWLQRRPDLVTLSV*