ggKbase home page

13_1_40cm_3_scaffold_20754_7

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: 4224..5804

Top 3 Functional Annotations

Value Algorithm Source
Macrolide-specific efflux protein MacA n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQP0_STIAD id=5224472 bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 533.0
  • Bit_score: 529
  • Evalue 3.20e-147
macrolide-specific efflux protein maca; K02005 HlyD family secretion protein Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.5
  • Coverage: 533.0
  • Bit_score: 529
  • Evalue 4.40e-147
efflux transporter, RND family, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 570.0
  • Bit_score: 311
  • Evalue 6.50e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 1581
GTGAAACCAAATCTCCTGGCCGCTGCGGCGGCTCTGACCCTCGCGGGCTGCCACAAGGACCAGCCCGCCCCCGTGTACGAGATGGTGCCGGTCCAGCGGCGCGACATCGTCGTCACCGCGTCGGCGGCGGGGACGATCCAACCGATCCTGACCGTGCAGGTCAAGTCGCAGGCGTCGGGCGCGATCACCGAGATGCGCGTCCAGACGGGCGACGACGTCCGGCCCGGGCAGCTGCTCGCCTTGATCGATCCGCGCCTGCCCAAGAGCGGGCTCGATCAGGCGAAGGCGACCCTGGAGGTGGCGAAGGCCCAGTACCAGAACGCCACGACCCAGCTCGCGCGCATGGACACGCTCCTCAAGACCCAGGCCGTGACGCAGACCGACTACGACAACGCCCGGGTCGCGTTCACGCAGGCCGAGGCGGCGCTCGTGAACGCCCGCGCGAACTTGAGCGACGCCCAGATCGCCTACGACCAGACCCGCGTGACGGCGCCGCTGACGGGCACGATTATTCAGAAGAACGTCGAGCAGGGCATGGTGATCTCGAGCCCGGCGCGCGACGTGGGGGGCGGCACCGTGCTCTTCCAGATGGCGAACCTGGATACGGTGCAAGTGCAGTCCATGGTGGACGAGACGGACATCGGCAAGGTCCAGCCGGGGCTGCCGGTGACGATCACGGTGGACGCCTACCCCAACCGGCCGTTCCAGGGCACCGTCCTCAAGATCGAGCCGCAGGCGACGGTGAGCCAGAACGTGACGATGTTCCCCGTGCTGGTGAACATCCAGAACCCTGAGCACCTGCTCAAGCCGGGGATGAACGCCGAGGTGGAGGTGCACGTCGGTCAGCGCCAGGGCGTGCTGGCGATCCCGAACTCCGCGCTGCGCACGCAGCGCGATGTCGCCTCGGCCGCGCAGGTGCTGGGCCTCGATGCCAACGACGTGCAGGCCCAGCTCGCCGCGGCCCCCGCGGCACCGCCCGCGCGGTTCGGCGGCGATACCGCCCAACGCGGCACCACGCTCGGCGCCGCGCCGGCTGCGGGAGACCCCGCCAAGCCCGCGGGGCGGGACAGCGCCAAGGCCGCCACCAATGTGATGACGACGCCGGACGGCCGGCAGATCACGCTGCCGGCCGGCTATACGCCGGAAAAGATTCGAGAGTTGTTCCGCAAGACCATGAGCGGCGGACAGCTCACACCGGCGGAGCAGGCGGCCATGAATCAGGTGCGGTCCCAGTTCGGCGCCGGCCGCGGCGGTCAGGGCGGCCAAGGCGGCGGCTTCGGCCCCGGACAGATGCGCCGCGGCGGCGCGTTCGCGTCGAGCTACATCGTGTTCGCGCTGCGCAACGGCAAGCCGACGCCGGTCAACATCCGCACCGGCCTCACCGATCTGGATTACATCGAGGTGACGAGCGGCTTGACCGAAAAGGACACCGTGCTGCTGCTGCCGAGCGCTTCGCTGGTCCAGGCGCAACAGGACATGCGCAACCGCTTCCAGAGCATGACCGGCGGCGGGCTGCCGGGCTTGCGCCAGCAGACCGGCGGCGCCGCGGGCAGCAGCGGCGGCACGACCAAGGCTCGCTGA
PROTEIN sequence
Length: 527
VKPNLLAAAAALTLAGCHKDQPAPVYEMVPVQRRDIVVTASAAGTIQPILTVQVKSQASGAITEMRVQTGDDVRPGQLLALIDPRLPKSGLDQAKATLEVAKAQYQNATTQLARMDTLLKTQAVTQTDYDNARVAFTQAEAALVNARANLSDAQIAYDQTRVTAPLTGTIIQKNVEQGMVISSPARDVGGGTVLFQMANLDTVQVQSMVDETDIGKVQPGLPVTITVDAYPNRPFQGTVLKIEPQATVSQNVTMFPVLVNIQNPEHLLKPGMNAEVEVHVGQRQGVLAIPNSALRTQRDVASAAQVLGLDANDVQAQLAAAPAAPPARFGGDTAQRGTTLGAAPAAGDPAKPAGRDSAKAATNVMTTPDGRQITLPAGYTPEKIRELFRKTMSGGQLTPAEQAAMNQVRSQFGAGRGGQGGQGGGFGPGQMRRGGAFASSYIVFALRNGKPTPVNIRTGLTDLDYIEVTSGLTEKDTVLLLPSASLVQAQQDMRNRFQSMTGGGLPGLRQQTGGAAGSSGGTTKAR*