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13_1_40cm_3_scaffold_5076_2

Organism: 13_1_40CM_3_Gemmatimonadetes_70_6

partial RP 14 / 55 MC: 1 BSCG 14 / 51 ASCG 7 / 38
Location: comp(504..1268)

Top 3 Functional Annotations

Value Algorithm Source
Oxidoreductase domain protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NXC2_GRAMM id=5225809 bin=16ft_combo_ws3_JS1 species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 243.0
  • Bit_score: 255
  • Evalue 5.60e-65
oxidoreductase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.8
  • Coverage: 247.0
  • Bit_score: 339
  • Evalue 5.40e-90
putative PLP-dependent enzyme possibly involved in cell wall biogenesis similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 244.0
  • Bit_score: 233
  • Evalue 6.40e-59

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 765
GTGAGCCGGCTGCGGCTCGGCGTGGTCGGCGCCGGGGCGTGGGGCCGCAACCACGTTCGCACCGCGGCGGGGTTGGCGGACGCCGAGCTCGCGGCCGTCTGCGATACGAGCGAGCCGACGCGGCAGCGGCTCGCCCGGCAGTATCCGGCCGCGCTGGTCACCGCCGACCTGAACGAGCTGCTCGGCAATGTGGATGCCGTCATCATCGCCGCGCCCGCAGGGACGCATGCCGACCTCGCGCGGCGCTGCATTGAGGCGGGGAAGCCGTGCCTCGTCGAGAAGCCCTTCGCGCTGACGACGCGGGATGCCGAGGCGGTCGCCAAGGCGGCGGCGACGCGCAAGGTCCCGGTCCTGCCGGGGCACTTGCTGCTCTTTCATCCGGCGGTCGAGCAGCTGCGGGCGCTGGTGGTGGGGGGGCAGTTGGGGCAGCTCTTCTATCTCTATGGCCTGCGGCTGAACCTCGGCCAGGTGCGGCAGGATGAGAACGCGCTGTGGAGCTTCGGGCCGCACGACGTCTCAGTCGCCCTCTTCCTCCTGGACGAAACGCCGGTGCGGGTCGCGGCGCAGGGGCACTGCTATCTCCAGCCCAAGGTCGAAGACGTGGTGTTCCTGACGATGGAGTTCCAGAGTGGGGTGCTGGCCCACGTGCAGCTCTCGTGGCTGGATCCGCACAAGGTCCGCAAGCTGACCGTGGTGGGGTCGAAGAAAATGGTGGTGTTCGACGACATGGAGCCGCGGAGTACGCCTCGTACGGTGAGGCCCTGA
PROTEIN sequence
Length: 255
VSRLRLGVVGAGAWGRNHVRTAAGLADAELAAVCDTSEPTRQRLARQYPAALVTADLNELLGNVDAVIIAAPAGTHADLARRCIEAGKPCLVEKPFALTTRDAEAVAKAAATRKVPVLPGHLLLFHPAVEQLRALVVGGQLGQLFYLYGLRLNLGQVRQDENALWSFGPHDVSVALFLLDETPVRVAAQGHCYLQPKVEDVVFLTMEFQSGVLAHVQLSWLDPHKVRKLTVVGSKKMVVFDDMEPRSTPRTVRP*