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13_1_40cm_3_scaffold_10877_3

Organism: 13_1_40CM_3_Acidobacteria_65_5

partial RP 24 / 55 BSCG 21 / 51 ASCG 5 / 38
Location: comp(1799..3394)

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 493.0
  • Bit_score: 522
  • Evalue 5.50e-145
Transcription-repair-coupling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L3_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 513.0
  • Bit_score: 443
  • Evalue 3.00e-121
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 513.0
  • Bit_score: 443
  • Evalue 8.50e-122

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1596
ATGGCACTCGACTTCCTGCTCGAGAGGTTCCAGGAGCTTCCCGCCACACGCTCGCTCATCGAGCGGCTGCCAGCTCCCGGGACGCGCGTCGGTGTGGGGGGCCTCCCCGGGTCAAGCCCGGCCGTGCTGGTCTCCACGCTGGCTCGCCGGCTGCCGCAGCGGGTGTTCGCCATCGTGGCGCCAACCCCGGCTGATGCCGAGCGCTGGCTCGCAGATCTGCAAACCCTGCTCGGATCCGAAATGATCGGGCTGTATCCACAGCGCGAGTCGCTGGGTGCCGAAGAGCCGCACTACGAGCTCGCCGGCGAGCGCATCGAAACGATCGAGGCGCTGCTGCGCGGCGCCGTTCGTGTCCTGATCACCACCGCGCGAGCCACCGCCGAGCGGACCGCCGTCCCGGCTGCGCTCGAGCTGGCGCGTCTCGTGATCGAGGTCAGTAAAGAGGAAAGGAGTCTGTCCGAGACGGTGCGCCGACTGAACGACATGGGATACGAGCGCGTGCCGACGGTCACCGAAGTCGCGCAGTATAGCGTCCGGGGCGGCATTCTCGACCTGTATGGCTTCGGTATGGCGACGCCCGTGCGTATCGAATGGTGGGGCGACGAAGTCGCGTCGGTGCGCAGCTTCGACCTGGACACGCAGCGGTCCGGTGAGGTTCTGAATCGCGTAACTGTCCTCCCGGTGCGCGCGGAATCGGTGCAGGGGCGCATGCAGGTAGGGCATGCTGCGCCCCTACAATCCAGTCTGCTCGACCTCCTACCGTCCGACACGATCGTCCTCGCCGATCAAGAATCCGCCGTCGAACGAGAGGTCGAGCGGGCCTGGTCGGACGCGGCCCATCATCTCGAAGTCGCGCGCCGCATGGGAGAGGAACCGCCGGCGCGTGAGGATTTGCTGGTGGATCCGGCGCAGTGGCGCGCGAGACTCAACACCCTCCCTCGCATTGCGCTGTCCGACGCGGAGACGGAGCAGCGGTTTCCGCTCGCCCCGCCAGAGCACGTCGACCGCGACATGAAACGCCTGCGCCAGATCGTCGCCGAGCCCCCGCCGACGGTGATTCTGTGCGACAACGAAGGCCAGCTCGAACGCCTGGAGGAGCTGCTGGGCTCTGACCGAGCAACGCTTGTCGTGGGGGCGCTCGAAGGCGGATTCATCATGCCCACGATGCGGGTCCTGACCGATCACGAGATCTTCCGGCGCGCGCGCCGACTGCGCCGTCCACGCCGTTACCGCAGCGCGGTCACGACGGCGGCATCCCGGCCGTTGACCCCGGGCGGATATGTGGTGCACCTCGAGCATGGGATCGGCATTTACCGCGGCCTGCAGACCATCTCCATCGGCTCGGATGGTGCGACACTCGAGGTTGCGGGGGTGGAATACGAGGGGGGCGCTCGCTTGAACGTTCCCCTGTACCGGATCGATCAACTCGAACCATATCGCACCGTGGGAGCGCCAGCGCGACAAGACGCGCGCCGCAATTCGGGCGATGGCGGCGGAGTTGCTGGACCTGTACGCGCGGCGGCAGCTCGCCCACGGGTATGCCTTCCCGCCCGATACGCCGTGGCAGCGCGAGCTCGAGTCTGCCTTCCTCTATGA
PROTEIN sequence
Length: 532
MALDFLLERFQELPATRSLIERLPAPGTRVGVGGLPGSSPAVLVSTLARRLPQRVFAIVAPTPADAERWLADLQTLLGSEMIGLYPQRESLGAEEPHYELAGERIETIEALLRGAVRVLITTARATAERTAVPAALELARLVIEVSKEERSLSETVRRLNDMGYERVPTVTEVAQYSVRGGILDLYGFGMATPVRIEWWGDEVASVRSFDLDTQRSGEVLNRVTVLPVRAESVQGRMQVGHAAPLQSSLLDLLPSDTIVLADQESAVEREVERAWSDAAHHLEVARRMGEEPPAREDLLVDPAQWRARLNTLPRIALSDAETEQRFPLAPPEHVDRDMKRLRQIVAEPPPTVILCDNEGQLERLEELLGSDRATLVVGALEGGFIMPTMRVLTDHEIFRRARRLRRPRRYRSAVTTAASRPLTPGGYVVHLEHGIGIYRGLQTISIGSDGATLEVAGVEYEGGARLNVPLYRIDQLEPYRTVGAPARQDARRNSGDGGGVAGPVRAAAARPRVCLPARYAVAARARVCLPL*