ggKbase home page

13_1_40cm_3_scaffold_27021_11

Organism: 13_1_40CM_3_Acidobacteria_65_5

partial RP 24 / 55 BSCG 21 / 51 ASCG 5 / 38
Location: 7758..8825

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PG64_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 351.0
  • Bit_score: 520
  • Evalue 1.70e-144
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 351.0
  • Bit_score: 520
  • Evalue 4.80e-145
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EPX63370.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cys similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 351.0
  • Bit_score: 520
  • Evalue 2.40e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cystobacter fuscus → Cystobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
ATGGCGACGGCAAAGCATCGGGCGATCGATCACCTGCGACGCGGCACGATGCAGGACCGCAAACACGAGCATTTGAGCCGCGAGCTCGACGAGCGACAAGTCAGTCCCGAAGCCGCGCTGGCGGCCGCCATCGACGACCAAGTGGGTGACGATCTGCTCAGCCTCATTTTTACGGCGTGCCATCCGGTGCTCGCGACGGAAGCACGCGTCGCGCTCACGTTGCGACTGCTGGGCGGGCTGACGACCGACGAAATAGCCCGCGCGTTCCTCGTTCCGAAGGCCACTATCCAACAGCGCATCGTGCGCGCCAAGCGCACCCTCGCCGCCGCGCACGTGCCGTTCGAGGTGCCGCGCGGCGCCGAGCTTACGGCTCGGCTTGAATCGGTCCTCGAGGTGCTCTATCTCATTTTCAACGAGGGCTACTCCGCGACCGCCGGGGACGATTGGGTGCGGCCGGCGCTGTGCGAGGACGCGCAGCGCCTGGGCCGCATTCTCGCCGAGCTCGCGCCGGACGTGGCCGAAGTCCATGGCCTGGTCGCGCTGCTGGAGATTCAGGCCTCACGCTTGCGCGCCCGCGTGAGTCCGGCGGGGGAGCCGATTCTGCTGCTCGACCAGGATCGGGGGCGGTGGGATCATCTGCTGATCGGCCGCGGTCTGGCGGCGCTCGAGCGCGCCGAAACACTGGGCGGCGCGTACGGTCCCTACACGCTCCAGGCGGCGATCGCCGCCTGTCACGCGCGTGCCCGCACGGCGGAGGAAACGGATTGGACGCGCATCGTGGCGCTCTACGACGCGCTGGCGCAGCTGATACCCTCGCCGGTCGTGGAGCTGAACCGGGCGGTGGCGCTCGGTATGGCGTTCGGGCCGGCCGCGGGCCTGGAGGTGGTCGATGCGCTGACAACGAATCCGGGGCTGGCCAGGTACCATCTGCTGCCGAGTGTGCGCGGGGACCTTCTGCTCAAGCTCGGCCGTTTTGAGGAGGCGCGCGCGGAGCTGGCGCGGGCCGCGGGGCTCACGCAAAACGTCCGCGAGCGCGAACTCTTGCTCAAGAAACTGGAGGGCTTGTGA
PROTEIN sequence
Length: 356
MATAKHRAIDHLRRGTMQDRKHEHLSRELDERQVSPEAALAAAIDDQVGDDLLSLIFTACHPVLATEARVALTLRLLGGLTTDEIARAFLVPKATIQQRIVRAKRTLAAAHVPFEVPRGAELTARLESVLEVLYLIFNEGYSATAGDDWVRPALCEDAQRLGRILAELAPDVAEVHGLVALLEIQASRLRARVSPAGEPILLLDQDRGRWDHLLIGRGLAALERAETLGGAYGPYTLQAAIAACHARARTAEETDWTRIVALYDALAQLIPSPVVELNRAVALGMAFGPAAGLEVVDALTTNPGLARYHLLPSVRGDLLLKLGRFEEARAELARAAGLTQNVRERELLLKKLEGL*