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13_1_40cm_3_scaffold_4300_3

Organism: 13_1_40CM_3_Acidobacteria_65_5

partial RP 24 / 55 BSCG 21 / 51 ASCG 5 / 38
Location: comp(3123..3818)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 201.0
  • Bit_score: 346
  • Evalue 4.00e-92
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12557003 bin=CNBR_ACIDO species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 199.0
  • Bit_score: 249
  • Evalue 3.60e-63
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 207.0
  • Bit_score: 145
  • Evalue 1.60e-32

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGAGGGTTCGTTTCAAAGTCCCTCTATCCTACCAGCGCAAAGGAACTTTCGGGTTTTGCCGGGGTCTAATCGAAGGTATAGTGGAAGCCTTGAAACAGGCACGGGTAGTCGGATGGTCTGACGTCGGCGGGCGCGAAGCCACGCTCGTGCAGCGCTGTGCAGACGGCGACGAAGCGGCCTGCGCTGATCTCGTGTCCGAACATCAGCGCATGGTGTTTCAGCTTGCCCTGAACCTGCTGGGCGACCGCGACGAGGCGCTCGACCTGTCGCAGGAAGTGTTCCTCCGCGTGTTCCGCACCATTCATCGTTTCCGCGGGCAGTCGAGCCTGCGGACCTGGATTTACCGTATCGCGGTCAACCAGGCGCGCAACCGTCATCGGTTCTGGCGCCGCCGCCACCGGGCCGACCAGGTGTCGCTCGATCAGCACATCGAAATGCACGGCGACTTCGTGTCGGCCGGCGAGTCGACGCCCGATCGCGTCCTCGCGCAGAAGGAGCTGGCCGAGCGGCTGCAGCACGCGCTCGACCACCTGCCGTTCGATCAGCGGACGGCGATCGTGCTTCGCGAAATCGACGGCCTCAGCTACGAAGAGATTGCTTTCTCGCTCGGCGTCGCGATCGGCACCGTGAAATCGCGCCTCACGCGCGCCCGCCAGGCGCTGCGTCTCGAGCTGCGCGAGGCGAGGACCGCATGA
PROTEIN sequence
Length: 232
MRVRFKVPLSYQRKGTFGFCRGLIEGIVEALKQARVVGWSDVGGREATLVQRCADGDEAACADLVSEHQRMVFQLALNLLGDRDEALDLSQEVFLRVFRTIHRFRGQSSLRTWIYRIAVNQARNRHRFWRRRHRADQVSLDQHIEMHGDFVSAGESTPDRVLAQKELAERLQHALDHLPFDQRTAIVLREIDGLSYEEIAFSLGVAIGTVKSRLTRARQALRLELREARTA*