ggKbase home page

13_1_40cm_3_scaffold_702_7

Organism: 13_1_40CM_3_Acidobacteria_65_5

partial RP 24 / 55 BSCG 21 / 51 ASCG 5 / 38
Location: comp(4664..5266)

Top 3 Functional Annotations

Value Algorithm Source
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 199.0
  • Bit_score: 166
  • Evalue 3.80e-38
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN id=12554095 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 36.1
  • Coverage: 194.0
  • Bit_score: 118
  • Evalue 8.40e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 603
GTGATTCGGACGAACCTCTCGACCCGGCCGTTCTACAACGAGCGCGCCGTGCATTTCTGGCTCCTGCTGGTCGCGCTGGCGGTCGTCGGCGCGACGATCTTCAACGTCACCCGGGTGCTCCGCTACTCGCGCAGCGACACAGAGCTTGCGACGCGAGCGGCGCGCGACGAAACGCGCGCGGCGGATCTTCACCAGCAGGCCGCACGGCTGCGCGCGACCGTGGATCCGCGGCAGATTGACTTCGCCTCCGCCGAAGCGCGCCTGGCGAACGAGCTCATCGACCGCCGGACCTTCTCGTGGACCGACCTGTTCAATCGTTTCGAAGCCACGCTGCCCGACGACGTGCGCATCACGGCGATCCGGTCGCGCGTGGACACCGACCACGGCGACATCTTGACGGTCAACGTCGTCGCGCGCTCGAGCGACGACGTCGATAAGTTCATGGAGAACCTCGAGGCGACGGGCGCGTTCGCCGAGCTCGGCCGTCGCATCGACGAGCACCTCAACGACCAAGGTCTGCTGGAAACGACGATCGAAATGATTTACACCCCATCGGGCACGACGCCGCCGGCGACGCGACGCACGGGAGCGGCCAAGCGATGA
PROTEIN sequence
Length: 201
VIRTNLSTRPFYNERAVHFWLLLVALAVVGATIFNVTRVLRYSRSDTELATRAARDETRAADLHQQAARLRATVDPRQIDFASAEARLANELIDRRTFSWTDLFNRFEATLPDDVRITAIRSRVDTDHGDILTVNVVARSSDDVDKFMENLEATGAFAELGRRIDEHLNDQGLLETTIEMIYTPSGTTPPATRRTGAAKR*