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13_1_40cm_3_scaffold_7566_5

Organism: 13_1_40CM_3_Acidobacteria_65_5

partial RP 24 / 55 BSCG 21 / 51 ASCG 5 / 38
Location: comp(2801..3346)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 177.0
  • Bit_score: 144
  • Evalue 1.30e-31
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 46.3
  • Coverage: 177.0
  • Bit_score: 155
  • Evalue 1.20e-35
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 177.0
  • Bit_score: 155
  • Evalue 6.00e-35

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 546
ATGGTGAATGACGACGCCGACGTAGTCGCCCGGGTGCTCGCTGGCGATGGAGAGGCGTTCGGGATTCTCATCCGGCGATATGAGCCGGGCCTGCTTCGTTTCGCGACGCGTATGCTCGGGAATCCCGATGCGGCGGCGGATGCGGTGGCTGAGAGTTTCGTGCGCGCCTACCGGCATTTGGCACAATGTCGGGACCCGTCGCGGCTGCGCAGCTGGTTGTACCGGATCACCGGGAATCGCTGTCGCAGCCATCTCGCGCGGCGGCACACGAACGACATTCCACTCAGCGAGGCGCCCGCGCCGGCGCTGGCGGAGGCGTCGGACACCTGGGAAGTGATCGAGCGCAGTGAGCAGGTCGCGCTCGTGGAACGCGCGCTCGCGGCGTTACCGGCCGAAAAACGTGAGGCGTTCGTCTTGAAGCACGTGGAGGGGATGAGCTACGAGGAGATGGCGGCGGTGACCGGGGCACGGATCCCCACGCTCAAGATGCGGGTGCATCGGGCCCGGGAAGCTTTGCTGGAAGCGCTGGAGGAGGTCGTACGATGA
PROTEIN sequence
Length: 182
MVNDDADVVARVLAGDGEAFGILIRRYEPGLLRFATRMLGNPDAAADAVAESFVRAYRHLAQCRDPSRLRSWLYRITGNRCRSHLARRHTNDIPLSEAPAPALAEASDTWEVIERSEQVALVERALAALPAEKREAFVLKHVEGMSYEEMAAVTGARIPTLKMRVHRAREALLEALEEVVR*