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13_2_20cm_scaffold_152_25

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: 23983..25371

Top 3 Functional Annotations

Value Algorithm Source
Two-component system, NtrC family, response regulator HydG n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SQ07_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.6
  • Coverage: 401.0
  • Bit_score: 317
  • Evalue 2.20e-83
atoC6; sigma-54 dependent DNA-binding response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 447.0
  • Bit_score: 461
  • Evalue 1.70e-126
sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 446.0
  • Bit_score: 442
  • Evalue 1.70e-121

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1389
GTGACCGCGGCCGGCGACGTGCTGCTGCTCGTCGTCCGACTGAGCGATTCGTTCAGCGATTTCTGGTCCGTCCTCGCCCGCGATGTCGGTGTCCCGCTCCTCGAATGGGCGCCGGCTCCCGGCGAGCTCCCCCCGTCCGGCGCGGGCGTGGTGCTCGTGGCAGCGGGGGGACACGAAGCGGAGATCGCAACCCTCCTCTCCCAGCTCTCGGCGCCGGCCGACATTCCCATCATCGCAGTGGGGTCGGCCGCCTCGCATCGGCTTGCCGCGCAGGTCGTCGCGGCGGGCGCAGCGGACTACTTCGCGCTCCCGGACGACCGCGACGACCTGCGCGACACCCTGGCCGCGGCGGTGCAGCGACGCCGGGCCGCGCTGGGTCGGGCGGCGCTCGCGCACCTCGAAGCCCAGGCGCACGCGTTCCGCGAGATCGTGGGAGACAGCCCCGCCCTGAGGGCTGTGCTGGAGCGCGCCGCCCGCGTGGTGCCGCACGCCGACGCCACCGTCCTCATCACGGGTGAGACCGGCACGGGCAAGGAGCTGCTCGCCCGGGCGCTGCACTACGGCGGCCCTCGCGCCGCAGCGCCGTTCGTGGAACTCAACTGCGCCGCCCTGCCGGCTCCGCTGCTCGAGAGCGAGCTGTTCGGCCACGAGCGCGGCGCCTTCACCGACGCGAAGACGACCAAGCCCGGCCTGTTCGAGGTCGCCCAGGGCGGCACGCTCTTCCTCGACGAAGTGGACCACCTCGCTCCCGAGCTGCAAAGCAAGCTGTTGCGCGCGCTCGAGCAGAAGTCGGTGCGCCGCCTCGGCGCCACGGCGGCACGCACCGTGGACGTGCGCATCGTGGCGGCGACGAACACCGACCTCGCGGCCGCGGTCCATACGGGTGACTTTCGGGAAGACCTGTACTACCGCCTCAACGTGATCACCCTGCACTTGCCCCCGTTACGGGAGCGAGGCGAGGACGTGATCCGGCTCGCCGAATTCTTCCTCGACAAGTTCGCCACGCAATACAAGCTGGCCCGACCGGCGATCACGCCTGAGATCCGGCGCGCCCTGCTCGCCCACGCCTGGCCGGGAAACATTCGCGAGCTGCGGAACGCAGTCGAGCGCGCGGTCTTGCTGTCACCCCCGGGTACGCTCGCCCTGGCGGAGGTCGCCGAGCGGCCGGCACTCCCGGCGCGGGCGAGCGCCGCCGGCCCGCTGCCCTTTCCGGCTACCCTTGCCGAAGTCCAACGCGCGGCCGCCCGGGCCATGCTCAACGCGGCCGGTGGCAACCGCTCCGAAGCCGCCCGCCGGCTCGGGATCTCACGCTCCCGATTGCAGCGTCTCCTCGAGGGGGAGGCGGAGCGAGACGCAGGTGAGGACGATGAGCCTGGTGACGCGAATTGA
PROTEIN sequence
Length: 463
VTAAGDVLLLVVRLSDSFSDFWSVLARDVGVPLLEWAPAPGELPPSGAGVVLVAAGGHEAEIATLLSQLSAPADIPIIAVGSAASHRLAAQVVAAGAADYFALPDDRDDLRDTLAAAVQRRRAALGRAALAHLEAQAHAFREIVGDSPALRAVLERAARVVPHADATVLITGETGTGKELLARALHYGGPRAAAPFVELNCAALPAPLLESELFGHERGAFTDAKTTKPGLFEVAQGGTLFLDEVDHLAPELQSKLLRALEQKSVRRLGATAARTVDVRIVAATNTDLAAAVHTGDFREDLYYRLNVITLHLPPLRERGEDVIRLAEFFLDKFATQYKLARPAITPEIRRALLAHAWPGNIRELRNAVERAVLLSPPGTLALAEVAERPALPARASAAGPLPFPATLAEVQRAAARAMLNAAGGNRSEAARRLGISRSRLQRLLEGEAERDAGEDDEPGDAN*