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13_2_20cm_scaffold_18111_4

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: 4527..5132

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG7_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 169.0
  • Bit_score: 186
  • Evalue 2.50e-44
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 172.0
  • Bit_score: 245
  • Evalue 6.40e-62
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 174.0
  • Bit_score: 186
  • Evalue 5.40e-45

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 606
ATGGAGCTCACCATCCCTGGGGTGGCGACACTGCACAGAGATCGGGACCAGGCGGCGCGGCGAAGTGGGAGGGGGGGGCGGGGGGGGGACGCGGAAACGGCCGACGCGGCGCTCGCCGCCGCCGGGGACGGCCGCGCGTTCGAGCGGCTCTACCGCGCGCACGTCGCCCGCATCCACAGCCTCGTGCGCCGCATGATGGGGCCGGATCAGGCGGACGACGTCACCCAGGACGTGTTCGTGCGCGCCTGGAACAAGCTGGCCACGTTTCGGGCCGAGGCCGCGTTCGGCACGTGGCTCCACCGCCTCGCGGTGAACGTGATCCTCGCGCGCCGCACCACCCTCGGCACCGAGCGCGGGCGCTACGACGACTCGGAGGACGCGCTGGAGGTGGTGCCGAGCCGGCCCGGCGCGGGCGTGGAGCTGTCGGTCGACTTCGAGCAAGCGATGGGCCGGCTGCCCGACGGGGCGCGCCAGGTGTTCGTGTTGCACGACATCGAGGGGTATCGCCACGAGGAGATCGCCGACATGCTGGGGATCGTCGAGGGCACGTCGAAATCGCAGCTGCATCACGCGCGCATGGCGCTGCGCAGGCATCTCGAGCGCTGA
PROTEIN sequence
Length: 202
MELTIPGVATLHRDRDQAARRSGRGGRGGDAETADAALAAAGDGRAFERLYRAHVARIHSLVRRMMGPDQADDVTQDVFVRAWNKLATFRAEAAFGTWLHRLAVNVILARRTTLGTERGRYDDSEDALEVVPSRPGAGVELSVDFEQAMGRLPDGARQVFVLHDIEGYRHEEIADMLGIVEGTSKSQLHHARMALRRHLER*