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13_2_20cm_scaffold_3533_9

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: 8575..9438

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y4_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 287.0
  • Bit_score: 447
  • Evalue 8.70e-123
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 288.0
  • Bit_score: 510
  • Evalue 2.00e-141
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 287.0
  • Bit_score: 447
  • Evalue 2.40e-123

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 864
ATGGCGCGGTCGAACGGAGGTAAGGCGAAGGCGTTCTTTCGTACCAATCCTTCCGGCGCCTTCGACCAGTACCTCCAAGACATCCAGAAGCTGCCCCTGATCAAAGCCCCCGCCGAGGAGCGCCGGCTGGCGCGGCGGGTGCAGCGGGGCGATGAAAAAGCCGCCGAGCGCCTGGTGACAGCCAACCTCCGATTCGTCATCTCCTACGTCAAGAAGTATCAGGGTCACGGTCTCGATCTCTCCGAGCTGGTCGCCATCGGAAACGAAGGGTTGCTCAAGGCGGTGAAGAAGTTCGATCCCGACCAAGGTGTGAAGTTCATCTCGTACGCGGTGTGGTGGGTGCGGCAGGCGGTGCTGAAGGCGTTGGCCGAGCAGACCCGCAGCGTCCGCATCCCGTTGAACCAAAACTCGCAGCTGATCCGCATGAGCCGCACCGAGACATACCTGTCGCAGGAGCTCGGTCGCGAACCCACCGACGACGAAATCGCCCTGGCCCTCGAAGACACCGTTGAAAACGTCCGCACCGCGCGCCGCATGACGGCCGCCGAGTTGTCGCTCGACGCCCCCGTGGATCGCACCGACAAGGACGCCGCCACGCTGGGCGAGCGGTTCGCCGGCCAGGAGGGCGGCGAGATCGAGGAGAAGACCGACGGCAAGCTGATGCGTGAGTTCATCGACCGCATCTTCCAGAAGTACCTCACCCCGCGCGAGCGCAAGATCCTCTACCTCTACTACGGCCTCGAGGAAGGCAGCGAGGCGATGACGCTGGAGAAGATCGGGGCGTTGATGGGCGTGACGCGGGAGAGAATCAGGCAGATCAGGGAGCGGGCGTTCGAGAAGCTCCGCGAGTCGCCTGATGGGAAG
PROTEIN sequence
Length: 288
MARSNGGKAKAFFRTNPSGAFDQYLQDIQKLPLIKAPAEERRLARRVQRGDEKAAERLVTANLRFVISYVKKYQGHGLDLSELVAIGNEGLLKAVKKFDPDQGVKFISYAVWWVRQAVLKALAEQTRSVRIPLNQNSQLIRMSRTETYLSQELGREPTDDEIALALEDTVENVRTARRMTAAELSLDAPVDRTDKDAATLGERFAGQEGGEIEEKTDGKLMREFIDRIFQKYLTPRERKILYLYYGLEEGSEAMTLEKIGALMGVTRERIRQIRERAFEKLRESPDGK