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13_2_20cm_scaffold_5948_15

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: comp(14085..15743)

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SECD_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 49.8
  • Coverage: 560.0
  • Bit_score: 503
  • Evalue 2.60e-139
  • rbh
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 568.0
  • Bit_score: 639
  • Evalue 3.20e-180
SecD export membrane protein similarity KEGG
DB: KEGG
  • Identity: 52.7
  • Coverage: 571.0
  • Bit_score: 539
  • Evalue 1.50e-150

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1659
ATGGCCAAGCTACGCTCACGACTGTTCATCATCGGCGGGCTGGTGCTCCTGAGCGTCTGGGCGCTGATCCCGGCCGACACGACCCAGCGGGTGCGCGACGCGACGACCGGCCGGATGAAGGACACGACGATCCGCCGCGTCCCGCTCAACCTGGGCCTCGACCTGCAAGGCGGTATCCACCTGGCCTTGGAGGTGGACCAGTCGAAGGGCCCGGTTCCCGATCCCGCGGAGGCGATCCACCGCGCCGAGCGCGTGGTGCGCACGCGGATCGACGAGTTCGGCACGACCGAGCCCGTGGTGCAGGTCGTCGGCAACGATCGGTTGATCGTGGAGCTCGCGGGCGAGAAGGACCCGGCGCGCGCCAAGGGCATCATCCAGCGGACCGCGTTCCTCGAGTTTCGCATCACCGATATGAAAAACCTGTTCCGGGACGCCCTCCCCGAGATCGACAAGACGCTGCGCCGGGCGGGGGTGAAGACGCCCGGCCAAGCGGGCGCCGCTGCCAACGTGACGCAGCTGTTCGGCGCCGACACCGGCAAGGGGAAGGCCAGGAACAAGAGCGAGAAGAGCAAAGCGGCCGCGAAGGATACGACCGAGCTCAACGCGCCCGGTCCGCTTGCCTCGCTGCTGTACCAGGGCCAGCTCCCCGGGGAGTTCCTCGTGCCCGAGGAGCAGGTGCCGGTAGCGGAGAGCCTGCTGGCGCGGCCCGAGGTGCAGCGGCTCATCCCGCGCGGGATCGAGCTCAAGTGGGGCACCGAGGTGGCGTCGCGCGCGGCGCGCACGTACCGCGCGCTGTACGCAGTCGAGGATCGTCCGATCATCACGGGGGAGGAGCTGGAAAAGGCGCAGGCGCAGCGGGACCCCATGACCAACCAGTCGGTCGTGAACTTCACGCTGTCGCGGCGCGGGGGACGCATCTTCGAGCGCGAGACCGGCCGGCACGTGCAGGACTACATGGCCATCATCCTCGACGGCCGCGTGCAGGGCCAGCCGCCCGTCATCAAGAGTCAGATCGGGCAGCACGGCCAGATCGAGCTGGGTGCGAAGCCGCTCCAGGACGCGCAGGACCTGGCGCTGGTGTTGCGCGCCGGCGCGCTGCCCGCGCCGCTCACCATCGTCGAGGAGCGCACTATCGGTCCCTCGCTCGGCAAGGACTCGATCAACGACGGCATCCGCGCCGGCGTCGTGGGCGTCGCGCTGGTGATCGTGATCATGGTCGGGTACTACCGGCTGTCGGGGGTGCTCGCCGTGTCGGCCCTGGGCCTGTACGTGCTGTTCACGCTCGCCGGGCTCGCGTGGTTCGGGTTCACGCTGACGCTGCCGGGGCTCGCCGGGCTCGTGCTCTCGGTGGGCATCGCCGTGGACGCGAACGTGCTGATCTTCGAGCGTATTCGGGAGGAGCTGCAGCACGGCAAGCTCGTGCGCACGGCGGTCGACGAGGGGTTCAAGCACGCGATGAGCGCGATCATCGACTCGAACGTGAGCACCGTGCTCACGGCCTTCATCCTCTATCTGGTCGGGACCGGCCCGGTGCAGGGCTTCGCCATCACCCTGATCATCGGCATCACGGCCTCGATGGTGACGGCCGTGTACGTGGTCCGGACCTTCTACATGATCTGGCTCGCGCGTCGGCCGGACATGGTCACCCTGAGCGTCTGA
PROTEIN sequence
Length: 553
MAKLRSRLFIIGGLVLLSVWALIPADTTQRVRDATTGRMKDTTIRRVPLNLGLDLQGGIHLALEVDQSKGPVPDPAEAIHRAERVVRTRIDEFGTTEPVVQVVGNDRLIVELAGEKDPARAKGIIQRTAFLEFRITDMKNLFRDALPEIDKTLRRAGVKTPGQAGAAANVTQLFGADTGKGKARNKSEKSKAAAKDTTELNAPGPLASLLYQGQLPGEFLVPEEQVPVAESLLARPEVQRLIPRGIELKWGTEVASRAARTYRALYAVEDRPIITGEELEKAQAQRDPMTNQSVVNFTLSRRGGRIFERETGRHVQDYMAIILDGRVQGQPPVIKSQIGQHGQIELGAKPLQDAQDLALVLRAGALPAPLTIVEERTIGPSLGKDSINDGIRAGVVGVALVIVIMVGYYRLSGVLAVSALGLYVLFTLAGLAWFGFTLTLPGLAGLVLSVGIAVDANVLIFERIREELQHGKLVRTAVDEGFKHAMSAIIDSNVSTVLTAFILYLVGTGPVQGFAITLIIGITASMVTAVYVVRTFYMIWLARRPDMVTLSV*