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13_2_20cm_scaffold_845_17

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: comp(17057..18859)

Top 3 Functional Annotations

Value Algorithm Source
msbA; lipid A export ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 599.0
  • Bit_score: 668
  • Evalue 9.10e-189
Lipid A export ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A621_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 595.0
  • Bit_score: 482
  • Evalue 8.60e-133
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 49.7
  • Coverage: 598.0
  • Bit_score: 539
  • Evalue 1.70e-150

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1803
ATGGGCCGCAGCGGCCGACTGTTCTCGCTGCTTCGTCCCTACACGTTCCTCTTCGTGGCCAACAGCGTCGCGACGCTCGTCGCGTCGGTGATGGACGGGGCCACGTTCGTGCTGCTCATCCCCTTCCTGCGCACGCTGTTCGGGCAGCAGGCCATTCCCGTGGGCGGCGGCTCGAGCGTCGAGCGGGTGCTCGCCGCCGTCGCGGGGCCGCTGCTCGCGGCGGGATCGCCCGAGGGGGCGCTCCGCAACGTCGTGGCGGTGCTGCTGGGCACGCTGGTACTCAAGAACGCCCTCTCGTACGCCGCGGCCGTCTGGAGCATCGCGATCCAGGAGGGCGTCGTCCGCGACCTGCGCGTCCAGCTGTTCGAGCACCTCCAGGTGCTCCCGCTCGGCTTCTTCCAGCGCACCCGCGGCGGCCAGCTCCTCGCCCGCGTCATCAGCGACACCGACCAGGTGAAAACGACGGTGACGGCCGCCCTGGCGTCGCTGCTCCAGAACATCAGCCTCATCGTCGTGTACGTCGCGATCCTCGTCGGCCTGTCGTGGCGGCTGACGCTCATCGCGCTGGTGTGCGCGCCGCTCCTGGTGCTCATCATCCGGCCGCTGGTCGGGAAGGTGCGGCGGCGCTCGCGCGAGCAGGTGGAAGACCGGGGCGAGCTCACGAGCCTCGTGAGCGAGCTGGTGGGCTCCATCAAGCTCGTGCGCGCCTACGTCGCCGAGGGATTCGAGGCGCAACGCTTTCGCCGGCTCGCCGATCGGTATCGGCGCCGGGTGCTGCGCGCGCAGCGCTACGCGACGCTCACGAGCCCGCTCTCCGAGGTGTTCGCGGGCGTCGTGATCGTGCTGATCTTCTTCGTCGGCACGCGGTGGGCCCTCGGCCAGGCGGCGACGCTCCGCCCCGAGGTGCTGATCGCGTTCATCGCCGTCGCGCTGCGGCTTATGTCCCCTGCCAAGTCCGTGGCCAACTATCCCACGGCCATGGCCGGCGCGCTCGCCGCCGCGGACCGCGTGTACGAGGTGCTGGACCTGGAGGCGGAAGAGGGCGACCGCCCCGGCGAGCAGCCCGCCCGCTTCGCCGAGCGCATCGAGTACCGCGACGTGTCGTTCTCGTACGACGGCCAGGCGCCGGTGCTCCGGGACGTGGACTTCGCGGTGTGCCGCGGCCAGGTGGCGGCGATCGTGGGGCCGTCCGGGGCGGGGAAGACCACCCTCGTGGACCTGCTGCCGCGCTTCTACGAGCCCACGGGCGGGGCCATCCACATGGACGGCACGCCCATCACGCGGTTCACGCGGCGCAGCCTGCGCGCGCTGATGGGGATCGTGTCGCAGGAAACGATCCTCTTGAACGACACCGTGTTCGCGAACATCGCCTACGGACGGAGCGACTTCTCGCTGGCCCAGGTCGAGGCCGCGGCGCGGGCGGGGAACGCCCACGACTTCATCTCGCACCTCCCGGCGGGGTACGAGACGCTGCTGGGCGAACGGGGGACCAGGCTCTCAGGCGGGGAGCGCCAGCGCATCGCCATCGCGCGGGCGCTGCTGCGTGACCCGCCGATCCTCATCCTCGACGAGGCGACGAGCGCGCTCGACACGGAATCGGAGCGCTTGGTCCAGGAGGCGATCGACCGCCTGATGGCGCACCGCACCGTGCTGGTGATCGCGCACCGGCTCACCACCGTGCGGCACGCCGACCTGATCGTCGTGCTGTCCGAAGGGCGGATCGTGGAGCGCGGCACGCACGACACGCTGTTCGCCGCGGGCGGCCTGTACCGGCGCTTCTACGACCTGCAGTTCCGCGTGTAA
PROTEIN sequence
Length: 601
MGRSGRLFSLLRPYTFLFVANSVATLVASVMDGATFVLLIPFLRTLFGQQAIPVGGGSSVERVLAAVAGPLLAAGSPEGALRNVVAVLLGTLVLKNALSYAAAVWSIAIQEGVVRDLRVQLFEHLQVLPLGFFQRTRGGQLLARVISDTDQVKTTVTAALASLLQNISLIVVYVAILVGLSWRLTLIALVCAPLLVLIIRPLVGKVRRRSREQVEDRGELTSLVSELVGSIKLVRAYVAEGFEAQRFRRLADRYRRRVLRAQRYATLTSPLSEVFAGVVIVLIFFVGTRWALGQAATLRPEVLIAFIAVALRLMSPAKSVANYPTAMAGALAAADRVYEVLDLEAEEGDRPGEQPARFAERIEYRDVSFSYDGQAPVLRDVDFAVCRGQVAAIVGPSGAGKTTLVDLLPRFYEPTGGAIHMDGTPITRFTRRSLRALMGIVSQETILLNDTVFANIAYGRSDFSLAQVEAAARAGNAHDFISHLPAGYETLLGERGTRLSGGERQRIAIARALLRDPPILILDEATSALDTESERLVQEAIDRLMAHRTVLVIAHRLTTVRHADLIVVLSEGRIVERGTHDTLFAAGGLYRRFYDLQFRV*