ggKbase home page

13_2_20cm_scaffold_888_10

Organism: 13_2_20CM_Gemmatimonadetes_70_9

partial RP 20 / 55 MC: 2 BSCG 17 / 51 MC: 2 ASCG 7 / 38
Location: comp(9787..11061)

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 50.6
  • Coverage: 425.0
  • Bit_score: 398
  • Evalue 6.80e-108
secretion protein HlyD family protein; K02005 HlyD family secretion protein Tax=GWC2_Gemmatimonadetes_71_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 435.0
  • Bit_score: 431
  • Evalue 1.00e-117
efflux transporter, RND family, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 426.0
  • Bit_score: 425
  • Evalue 1.90e-116

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Gemmatimonadetes_71_10_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1275
ATGTCCACACGCAACAAAGTGCTGCTCGGAGCGGGGGCCGCCGTCCTCATCGTCGGCCTGGTGGTCATCAGCGCCGGCGCGCGCCGCGACCGCGGCCAGGAGGTGCGGTTCGAGAAGGTGGGCCGCCGCGACCTCGTCGCCGCCGTCACGGCGAGCGGCAAGATCCAGCCCAAGAAGAAGGTCGACATCAGCGCGGACATCACCGGTCGGATCACCAAGATCGCCGTGCGCGAGGGCGAGCTCGTGACGAAGGGCCAGTTCCTGCTCCAGATCGATCCGACGGTGTACCAGGCGAACCTACAGCAGGCGGCGGCCAACATGGCCTCGTCGCAGGCGGCCGCGGTGCAGGCGAAGGCGAACCGCGATCAGGCGGACCGCGCCCTGCAGCGCACCAAAGAGCTGCGGACGCAGAGCCCGAACCTCGTGTCGCAGGAGCAGCTCGAGCAGGCACAGACGGCGTTCGACGTCGCCGAAGCGAACCTCACCGCGGCGACGCACCAGGTCGACCAGGCGCGCGCCGCGGCGCAGTCGGCCCGTGACAACCTCCGCAAGACGACCCTCATCGCGCCCATGGCCGGCCGCGTGACGCGGCTCCCCGTCGAGGAAGGGGAGGTCGCGGTCCCGAGCACGTTCTCGAAGGACATCGGCCTCCTCATGACGATCTCCGACCTGTCGGTGATCCAGGCCAAGGTGAAGGTCGACGAGACCGACGTGGTGCGGGTCCACCTCGGTGACTCGGTCGAGGTCTCGATCGACGCGTTCCCCGATACCACCTTCACCGGCCAAGTGACCAAAGTGTCGAACTCGAGCGTGCTCGACGCCACCCAGAGCGCGACGGGCTCGAACGAGCGCGCCGTGGATTACCAGGTCGAGGTGACGCTCAACAAGCCGCCGACCGACATCCGCCCCGACCTCTCCGCCACCGCGCGGATCGTTACGGACACCCGCAAGCAGGCGCTGTCGATCCCGATCATCGCGCTCACGGTGCGCGAGAACAAGCCGGTCTCCACGGAGAACCGCCCGGTGGACACGGCGACCGCCCGCAAGAAGAAGGAGACCGAGGGCGTGTTCGTGGTGAAGGACGGCGTCGCCACGTTCCGGCCGGCGAAGGTCGGCATCGCCGGCGACGAGTACTTCGAGGTGCTGGACGGGCTCCAGCAGGGCGAGTCGATCGTCGCCGGGCCGTATCAGGCCATCCGCGACCTCAAGGACGGGGCGCACGTGCGGGCGATGAAGCAGGCGGCCGACACGACCAAGAAGAAAGCCGCCGCATGA
PROTEIN sequence
Length: 425
MSTRNKVLLGAGAAVLIVGLVVISAGARRDRGQEVRFEKVGRRDLVAAVTASGKIQPKKKVDISADITGRITKIAVREGELVTKGQFLLQIDPTVYQANLQQAAANMASSQAAAVQAKANRDQADRALQRTKELRTQSPNLVSQEQLEQAQTAFDVAEANLTAATHQVDQARAAAQSARDNLRKTTLIAPMAGRVTRLPVEEGEVAVPSTFSKDIGLLMTISDLSVIQAKVKVDETDVVRVHLGDSVEVSIDAFPDTTFTGQVTKVSNSSVLDATQSATGSNERAVDYQVEVTLNKPPTDIRPDLSATARIVTDTRKQALSIPIIALTVRENKPVSTENRPVDTATARKKKETEGVFVVKDGVATFRPAKVGIAGDEYFEVLDGLQQGESIVAGPYQAIRDLKDGAHVRAMKQAADTTKKKAAA*