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13_2_20cm_scaffold_1080_19

Organism: 13_2_20CM_Verrucomicrobia_54_12

near complete RP 47 / 55 BSCG 45 / 51 ASCG 11 / 38
Location: comp(16257..16838)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJL6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 184.0
  • Bit_score: 206
  • Evalue 2.30e-50
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49422.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 191.0
  • Bit_score: 326
  • Evalue 2.10e-86
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 177.0
  • Bit_score: 177
  • Evalue 4.10e-42

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 582
ATGGATGATACTAACGCAAGTGCGCTTGTTCGTGCTGCGCTCCAGCATGATGATGAGGCGGCTCGCGCGTTGGTGCGAGAGCTTTATCCGCTCGTCGCCAAAATCGTCCGCGCTCATCGCCCGCATCGAACGGATGAAGAGGATCTTTGCCAAATGATTTTCATCAAAGTATTCCAGAAATTATCGCAATTTTCCGGCAAGGTGCCCCTGGAGCACTGGGTCTCACGCGTTGCAGTCAACACTTGCCTGAACCAAATTCAGCGGGAGAAAATACGGCCCGAGCTTCGTCACGCTGATTTAAGCGTGGAAGAGCAAGCGGTGATTGAGAACCTGACAACATCCGCCGATGAGTTGGCGCCGGACCAGCGTTTTGCCTCGCGACAACTGGTTGAACATCTTCTCGCTGCGCTCAAACCGGTCGAGCGGCTGGCTATTGATCTGCTATACTTACAAGGACGTTCGGTTGAAGAGATCCGCAAAATCACCGGATGGAGCGCGGCGCTTGTTAAAGTACGAGCGTTTCGAGCGAGACAAAAAATGAAAGAATACCTCGCCAGGATTTCGGCAAAGGAGGGAGCATGA
PROTEIN sequence
Length: 194
MDDTNASALVRAALQHDDEAARALVRELYPLVAKIVRAHRPHRTDEEDLCQMIFIKVFQKLSQFSGKVPLEHWVSRVAVNTCLNQIQREKIRPELRHADLSVEEQAVIENLTTSADELAPDQRFASRQLVEHLLAALKPVERLAIDLLYLQGRSVEEIRKITGWSAALVKVRAFRARQKMKEYLARISAKEGA*