ggKbase home page

13_2_20cm_scaffold_1742_1

Organism: 13_2_20CM_Verrucomicrobia_54_12

near complete RP 47 / 55 BSCG 45 / 51 ASCG 11 / 38
Location: comp(3..2981)

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NM4_SOLUE similarity UNIREF
DB: UNIREF100
  • Identity: 36.4
  • Coverage: 577.0
  • Bit_score: 344
  • Evalue 4.60e-91
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49190.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 622.0
  • Bit_score: 484
  • Evalue 4.00e-133
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 36.4
  • Coverage: 577.0
  • Bit_score: 344
  • Evalue 1.30e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 2979
ATGCAATCGCGACGTTTCTCTGGGCTGCCGCTCATCGGCATCTTGTCCGTCATCTACTTCATCGCCGGCAAACTCGGCTTGATGCTGGCGTCGTTGCACGCGAGTGCATCGCCAGTATGGCCGCCGGCGGGAATCGCGCTTGCCGCATTGCTCTTGCTCGGTTATCGCGCGTGGCCGGCCATTTTTATCGGTGCATTTCTGGTGAACGTCACAACTGCGGGAAATGTCGCTACGTCATTTGCCATCGCCACCGGCAACACGCTCGAGGCGCTCGTGGGCGCCTGGCTGGTGAATCGATTCGCCGGCGGCACAAATGTCTTTGATCGTCTACAAGGCGTTTTCAAATTTGCGCTCGCGGCAGGGATCAGCGCCATCATTAGCCCTGCTTTCGGCGTGACGAGTCTTGGAGTCGCCGGCTTTGCCGATTGGGCAAACTACGGCGCGATTTGGCTGACATGGTGGCTCGGAGATGTAACTGGCGATCTTGTTTTCACTCCCCTAGTTCTCCTGTGGAGTGTTGCCTCAAAACGACGTTGGAATAAAAAGGAATCTGCCGAAGTCGGCGCGCTCCTCCTGTTGCTGGTGCTGTTGAGCGGGGTGGTCTTTAGCGGATGGCCTGCCGTTTCCGCCCGAAATTATCCAATCGTTTTAATTTGCGGACCGATTGTGATTTGGACTGCCTTCCGCTTTACGCAACGCGAAACTACCACGGGGATTTTCATTCTGTCCGCGGTCGCGGTGTGGGGAACGCTGCATGGCTTCGGCCCATTCGTCAGCGAGACGGAAAATCAGTCGCTTCTCGCCGTGCAATGGTGGACAGCTGTGCTGTCAATTACGGCGATGGGGCTTTCCGCCGGTATGGCCGAACGCCGGCGCGTTGAGGAAGAGCTTCAGCAACAAAAGATAGTTGTGGAGACCGCCAACAGGACCAAAGACCATTTCCCGGCCATGCTTTCGCACGAACTTTGTGCTCCAATCACTCCGGTCATTTCCGCATTGGAATCGCTGGAGACAGAGCCGGCGCAAACTGAGGAAGACGAGTCCGTGGAAACGAAGTCCGATCTGGAATTCGAGATCGCGCACCTTCTCTTAATCGACATGGCTGGTTATTCCAAGCTGCTAATCAATGAGCAGATTGAGTTGCTGCAGGAACTAAATCAAATCGTGCGCAGCAGCGAATGTTTTCGATCGGCGGAAGCAAGCGGCAAGCTCAATCGAGTGCCGATGGGAGACGGGATGGCGCTGCTTTTTTTTCATAGTCCGGAAGAACCGGTGCGGTGTGCGTTCGAGATTAGCAGAGCGTTGCAAGATCATCCGCGGATTCGGTTGCGAATGGGGGTTCACAGTGGCCCTGTCAATAGAATCATCGATGTTAATGATAAAACGAACTTTGTAGGATCGGGAATCAATGTCGCGCAGCGAGTGCTTGATTGCGGTGATGCCGGACACATTCTCTTGTCGGGGCATGTCGCGGAAGATTTAGCGCAATACCGCCAGTGGCAACCGTCCTTGCACGACTTGGGCGAATGCGAGGTGAAGCACGGACTACGCTTGCATCTGTTTAATCTCTACAAAGAGAATCTCGGTAATCCACAGGTCCCGGAGAAACTCAGGCGCAGAAGAAGGTGGACGCAAGAGTCGGACATAGTTCGCCCAGTTAGCCTGCCCCGGCGCCCAAGGTCCCTGCTGGTAATTGCTTTAGTAGTCGCTGGCCTCGCTATGGTGATTAGTTCTTTGACCTTTTTCCAGCGATTGTCACTGAGGATGACCCCATCGACTCCTCCCGAGGAGACGGGTAGCAAGGGCACCCTTTTGATTCCCGAGAAAAGCATCGCCATTCTTCCCTTCGAGAATTTGAGCGTCGACAAGGCCAATGCCTACTTTGCGGACGGCATCCATGACGAGATTCTGATGCGCTTATCCAAGATTGCCGATTTGAAGGTCATCTCGCGCACATCGACACAGCATTACAAAAGCGCGCCAGAAAACCTGCCTGAGATCGCAAAACAACTGGGAGTAGCCCACATCCTTGAAGGAAGGGTTCAGAAGAGCGGCGACGCCGTGCGTGTGAACGTGCAGCTAATCAGGGCAGCCAATGATTCCCAGCTTTGGGCCGACACCTTTGATCGGAAACTGACCGACACCTTCTCTGTTGAGAGTGAGGTGGCCAAAGCCATCGCCGATCACTTGCAAGCGAAGCTCACCGGTCATGAAGAGCAAGAGATTGCCGCGAAGCCAACAGACAATCCTGAGGCTTACGACACCTACTTGCGTGGTCTGGCTTATACACTGAAAACTTACCCCACAAGCGCCAACGTCCTTGGCGCACAGAAATATCTCAGAGAAGCGGTGCGGTTGGATCCGAAGTTCGCGCTTGGTTGGGCGCTGCTGCGGCAGGCAGCCGAAACCGCGCTCACTCTTCAGCCCAACCTTGGCGAGGCTGTAGTGGCCAAGGGAGCTTACCACTACTGGATTCTAAAAGATTACGACCCCGCAGTGCGTTACTTTGAGCAAGCACGCCAACTGCTGCCGAATAGCAGCCGGATTCCTGAATTGCTGGCTTATGTCGCACGGAGACGAGGCCAGTGGGACCGGAGCAAAGCCTACTTCAACGAAGCCGAGCGTCTCGACCCGCGCGATGTTAATCTCCTCACGCAGCAGGCGACTACCGATATCGCTCTTCGCCGTTTCCCGGAAGCTCTGCGAAAGCTTGATCAGGTTCTCGATATCACACCAGACGACGTCGACACCCTCGTGACAATGGCGACTATCGCACAGGCCGAGGGCGACCTACCGCGTGCCGTGGCGCTCCTCGCTGCGCTCCACCCGGGTGCCGACGACTCGGGGGCCGTGGAAACACAAGTTTACCAGGCAATCCTTGAACGCCGTCCTGCGCAAATCATCTCTCGGTTAAAGGAGATACTAGCCAAGCCTGATCCAGCGTTGGGTTACATCAATGGCGAACTGCGCTTTTGGTTA
PROTEIN sequence
Length: 993
MQSRRFSGLPLIGILSVIYFIAGKLGLMLASLHASASPVWPPAGIALAALLLLGYRAWPAIFIGAFLVNVTTAGNVATSFAIATGNTLEALVGAWLVNRFAGGTNVFDRLQGVFKFALAAGISAIISPAFGVTSLGVAGFADWANYGAIWLTWWLGDVTGDLVFTPLVLLWSVASKRRWNKKESAEVGALLLLLVLLSGVVFSGWPAVSARNYPIVLICGPIVIWTAFRFTQRETTTGIFILSAVAVWGTLHGFGPFVSETENQSLLAVQWWTAVLSITAMGLSAGMAERRRVEEELQQQKIVVETANRTKDHFPAMLSHELCAPITPVISALESLETEPAQTEEDESVETKSDLEFEIAHLLLIDMAGYSKLLINEQIELLQELNQIVRSSECFRSAEASGKLNRVPMGDGMALLFFHSPEEPVRCAFEISRALQDHPRIRLRMGVHSGPVNRIIDVNDKTNFVGSGINVAQRVLDCGDAGHILLSGHVAEDLAQYRQWQPSLHDLGECEVKHGLRLHLFNLYKENLGNPQVPEKLRRRRRWTQESDIVRPVSLPRRPRSLLVIALVVAGLAMVISSLTFFQRLSLRMTPSTPPEETGSKGTLLIPEKSIAILPFENLSVDKANAYFADGIHDEILMRLSKIADLKVISRTSTQHYKSAPENLPEIAKQLGVAHILEGRVQKSGDAVRVNVQLIRAANDSQLWADTFDRKLTDTFSVESEVAKAIADHLQAKLTGHEEQEIAAKPTDNPEAYDTYLRGLAYTLKTYPTSANVLGAQKYLREAVRLDPKFALGWALLRQAAETALTLQPNLGEAVVAKGAYHYWILKDYDPAVRYFEQARQLLPNSSRIPELLAYVARRRGQWDRSKAYFNEAERLDPRDVNLLTQQATTDIALRRFPEALRKLDQVLDITPDDVDTLVTMATIAQAEGDLPRAVALLAALHPGADDSGAVETQVYQAILERRPAQIISRLKEILAKPDPALGYINGELRFWL