ggKbase home page

13_2_20cm_scaffold_526_20

Organism: 13_2_20CM_Verrucomicrobia_54_12

near complete RP 47 / 55 BSCG 45 / 51 ASCG 11 / 38
Location: 20885..22222

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate decarboxylase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744D7F similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 441.0
  • Bit_score: 522
  • Evalue 5.60e-145
  • rbh
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120 similarity UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 445.0
  • Bit_score: 496
  • Evalue 3.50e-137
lysA; diaminopimelate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 440.0
  • Bit_score: 490
  • Evalue 3.90e-136

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Akkermansia sp. CAG:344 → Akkermansia → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1338
GTGCATTCGTTTCGTTACCGCGACGGGCATCTCTACTGCGAAGACGTCGATCTTGCCCGTGTCGCGGAGGAGCTCGGCACGCCGACTTATGTTTACAGCGCGGGGACAATTCTCGATCACTACGCGCGACTGGATACTGCGCTTCAGTCTCTCGATCACCTGATCTGTTACGCAGTCAAAGCAAATTCAAATCGCGCGATCCTGAAGTTGCTCGCCGATGCGGGCGCAGGTTTCGACATCGTTTCGGGCGGCGAACTTTATCGTGTGCTCGCTGCTGGTGGCGATCCCGCCAAATGCACGTTCGCAGGCGTGGGCAAATCGCGAGAGGAGATCGAGTACGCGCTAGAGCAGGGGGTTTACAGCTTCAATGTCGAGAGTGAAGCGGAACTGGAACAGATCGATCGCATCGCGGGCGTAAAAGAAACGCGCGCGCCGATTGCATTGCGCGTGAATCCCGATGTCGATCCGCATACGCACGAGTATATCTCGACCGGTTCGCGCGAAAATAAGTTCGGCATCGCGCTGGATCGCGTCGCTGCGGTTTACGAGCAAGCCGCCAAAATGCGCAACGTCGAGATGGTTGGCATCCAAATGCATATCGGCTCGCAAATTGCAGAGGCGAAGCCCTTCGCGAGCGCGATCGGAAAAGTGGCGCCCATCGTGCGAGAGCTGAAATCAAAATACGGAATCAAGTTCCTTAGCATTGGTGGCGGCATGGGAATTGTTTACCGGCGCGCACTCGAGAGCGGATCAGGCAAATGGTGGCGCGATCACGGTGGCGAATCGTTTGCGTTCAGCGTCCGCGATTATGCGGATGCGATTGTGCCAGAACTGTGCCAGTTACATCTTCGCGTTCTGGTGGAGCCTGGTCGTTTTCTTGTTGGCAACGCCGGTGTGTTGCTCACACGCGTGCGTTTCATTAAAAAATCGGGTGCGAAGAAGTTTGCGATTGTCGATGCTGGGATGAACGACCTCATTCGTCCTGCGCTTTATCATAGTTATCACGAGATTGTGCCGGTCTGTAGGGCGTCCGCCGCGGCGGACGCCAGTCAAAATTCGATTACGGGCACGAGCAAAAGGGCTGAGAAGATCGACATTGTTGGGCCGGTATGCGAGTCGGGCGATTTTTTTGCTCTGGATCGGGAGATGCCTGAGCTCCATGAAGGCGATCTGCTCGCCATCATGAGCGCCGGCGCGTACGGCCTTGTGATGGCTTCCAATTACAATTCGCGTCCGTTGCCCGCGGAAGCGCTGGTTCGTGGCAACCAGCTTGCGCCGATTCGAAAACGGCAAACTTGGGAGGATCTAGTGGCGGGAGAGATCGATCCGAAGTGGTAG
PROTEIN sequence
Length: 446
VHSFRYRDGHLYCEDVDLARVAEELGTPTYVYSAGTILDHYARLDTALQSLDHLICYAVKANSNRAILKLLADAGAGFDIVSGGELYRVLAAGGDPAKCTFAGVGKSREEIEYALEQGVYSFNVESEAELEQIDRIAGVKETRAPIALRVNPDVDPHTHEYISTGSRENKFGIALDRVAAVYEQAAKMRNVEMVGIQMHIGSQIAEAKPFASAIGKVAPIVRELKSKYGIKFLSIGGGMGIVYRRALESGSGKWWRDHGGESFAFSVRDYADAIVPELCQLHLRVLVEPGRFLVGNAGVLLTRVRFIKKSGAKKFAIVDAGMNDLIRPALYHSYHEIVPVCRASAAADASQNSITGTSKRAEKIDIVGPVCESGDFFALDREMPELHEGDLLAIMSAGAYGLVMASNYNSRPLPAEALVRGNQLAPIRKRQTWEDLVAGEIDPKW*