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13_2_20cm_scaffold_662_2

Organism: 13_2_20CM_Acidobacteria_57_17

partial RP 32 / 55 MC: 1 BSCG 33 / 51 ASCG 10 / 38
Location: 1672..3459

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane autotransporter n=1 Tax=Pseudomonas sp. CF161 RepID=S6IU07_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 28.0
  • Coverage: 600.0
  • Bit_score: 140
  • Evalue 6.10e-30
Ig domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 28.6
  • Coverage: 658.0
  • Bit_score: 175
  • Evalue 4.80e-41
Outer membrane autotransporter {ECO:0000313|EMBL:EPL05262.1}; TaxID=911241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 28.0
  • Coverage: 600.0
  • Bit_score: 140
  • Evalue 8.60e-30

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Taxonomy

Pseudomonas sp. CF161 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1788
GTGACGGCTACTTCCGTAACGGATTCCGCAAAGTCCGCGTCGGTAACCATCAACGTCACCCCCGCTCCATCCGTGACCACGACGTTGCTTCCGGCGGGGACACAGGGTACGGCGTACAGCCAGACAGTGGCAACCTCCGGAGGCGCCGGGATGGTGACGCTGGCGGTCAGCAGCGGAGTCTTGCCGACGGGATTAAGTATGGACTCGTCAGGACACATCACGGGTACACCGGCGGGGCCAAGTGGCACAACCAGCTTCACGGTGAAGGCCACGGATTCGAGCAGCGCGGGGGCGCAATCCGCCGTGCAGAATCTGAGCATTACGGTCAACAGCTCCACGCCAGCCATGACTTGTGGATCCGGGCATGAATCCCTGTTGAATGGGCAGTACGCATTCACCATGCAAGGTTTCGATGCAAACGGGGCGGTGGCACTGGGGGGCATGTTCGATGCCGACGGCGCGGGGCACATTGCGCACGCAATCGGCGTAGAAGACATCAACAGCAGCACAGGGGTTCAAACAAACGTTTCCATAGACGGCACCAGCAGCTCGTATTCCGTGGGCGGTGACAACCGCGGGTGTGTGGCTATTGCGACTTCCGCTGGAACGGCGATCTATCGGTTTGCGCTTGGAGTGATCAGGTCGGGCGTAGCGAGTAAGGGCCGCTTCATCGAGTTTGATAACACGGGAACGCTGGGGTCGGGAGTCTTCGAGAAGCAGGATCCCAGTGCGTTCTCGGCGTTCGGGATTAACGGCAACTACGCATTTGGCGCCGATGCGACGAGCGCGCTTGTCAACAGCAGTCGCAACCGATTCGCCATGGTAGGTGCGTTTGCGGCGAACGGAAGCGGAGGCATCACCAGCGGCGAGTTGGACGCCAACAATAGCGGCAACGTCAATAAGAGTGGCGGTTTGAATTATCCGATGAGCGGCTTGGCTTTTACTGGGAGTTACGCGGTGTCATCGAATGGCCGAGGCACGATGAATTTCATGGTCGGAACGCAAACCGTCAACATGAGCTTGTACATGGTTTCCGCTAGCGAAGTATTGTTTGTCAGCGTCGACCCACAGTCGAGCAACGCTCCGTTTACGGGATCGGCACTGCAGCAATCGGGGGCGCCATTTTCGATTTCGTCGGTGAGCGGCCCGAGCGTTCTTTACGTGAGTGGGCTGTGCGCAAGCTGCGGGCCGAATGCGACGCCAGCTTCGGACCTGATCGCGGGCATATTCACGGTTTCGAATTCCGGGAGTTATTCTCTTACTGGAGAAGAAAGCAAAGCAGGAGGCATTTCATCGTTCAAGGATGCGGCGACTGTTAGCGTAGCTCCTAACGGCAGGGTGAGTGCAGCGGGGGGAGCGCGGCCTCCTCTGCTTTATCTAGTGAGCCCGGGCAAAGCGTTTGTGATGCTGGTGGATGGAGGAGTGTACGCAGGCTTCGCGGAACTGCAAACCGGAGGACCGTTCACGAATCATTCCGCGAACGGGACGTACGTCTTCGGCTCGATCACGGTGACGCACCAGAACATAACTCACGAGTCCGGCGTGGCCACTTACGACGGAATAGGGACGGTTTCAGGAACGAGTGACACAGCGTTGGTAGGCTCGACCTCATCGAATCCAAGCATAAAACCTGATCAGGCCTTCAACTATACGTACCTGGTTTCCCCAAACGGGAGGTTGGCGTTGACGAACGGCCCGGTGATCTACCTCATTTCACCGACCAAACAGGTGGTCCTTAATTCGGACCCATCGGATCTGTATCCGAGGCTTGAACCCGTGGAGCAGTAG
PROTEIN sequence
Length: 596
VTATSVTDSAKSASVTINVTPAPSVTTTLLPAGTQGTAYSQTVATSGGAGMVTLAVSSGVLPTGLSMDSSGHITGTPAGPSGTTSFTVKATDSSSAGAQSAVQNLSITVNSSTPAMTCGSGHESLLNGQYAFTMQGFDANGAVALGGMFDADGAGHIAHAIGVEDINSSTGVQTNVSIDGTSSSYSVGGDNRGCVAIATSAGTAIYRFALGVIRSGVASKGRFIEFDNTGTLGSGVFEKQDPSAFSAFGINGNYAFGADATSALVNSSRNRFAMVGAFAANGSGGITSGELDANNSGNVNKSGGLNYPMSGLAFTGSYAVSSNGRGTMNFMVGTQTVNMSLYMVSASEVLFVSVDPQSSNAPFTGSALQQSGAPFSISSVSGPSVLYVSGLCASCGPNATPASDLIAGIFTVSNSGSYSLTGEESKAGGISSFKDAATVSVAPNGRVSAAGGARPPLLYLVSPGKAFVMLVDGGVYAGFAELQTGGPFTNHSANGTYVFGSITVTHQNITHESGVATYDGIGTVSGTSDTALVGSTSSNPSIKPDQAFNYTYLVSPNGRLALTNGPVIYLISPTKQVVLNSDPSDLYPRLEPVEQ*