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13_2_20cm_scaffold_2963_15

Organism: 13_2_20CM_Gemmatimonadetes_69_8

partial RP 18 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: 11205..11828

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3R5_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 184.0
  • Bit_score: 153
  • Evalue 1.90e-34
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 192.0
  • Bit_score: 182
  • Evalue 1.40e-43
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG93808.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 192.0
  • Bit_score: 182
  • Evalue 6.90e-43

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 624
TTGCGGAACTCCTCACGTGAAACCAAGTTCGAGGCCGTGGCCAGCCAATCGGACCGCGCGCTCGTGGAGCGCTTGACCGCGGGCGACGACCGGGCTTTGGGGGAGCTGTACGATCGTCACGGCACGGCGATGTACGCGCTCGCCGTCGCGATCGTGCGGGAGCGGGCCGATGCCGACGAGGTGGTGGCGGATGCGTTCGGTCAGGCGTGGCGGACGGCGGTGCGGTTTGACCCGAGCCGAGGGAGCGTGGCGGCGTGGCTTGCCACCATCACCCGCACCCGGGCCCTCGACCTGTTGCGGTCGCGCGGCCGCCGCGCGCGGGCGCTCGCGCGCGCCGCGAGTGAGCGCAATGATGGACTCGCCGCGCCGCTGGCCGCGGCGGGCGACGCCCCGGACCGTGGCATCGAGCGCGAGGAGTCCCAGCGGCTCGTCGCCCGCTCGCTCGCCGAGCTGCCGGACGTGCAGCGTCGCGTGATCGAGCTGGCGTATTTCGGCGGCCTCACGCAGACCGAGATTGCCGCGGAGCTGCGGGAGCCGTTGGGGACGGTCAAGACACGCATGCGCGCCGGAATGGAAAAGCTGCGCGGCTCGCTCGCGCCGCTGCTCTCGAGCGAGGCGTCATGA
PROTEIN sequence
Length: 208
LRNSSRETKFEAVASQSDRALVERLTAGDDRALGELYDRHGTAMYALAVAIVRERADADEVVADAFGQAWRTAVRFDPSRGSVAAWLATITRTRALDLLRSRGRRARALARAASERNDGLAAPLAAAGDAPDRGIEREESQRLVARSLAELPDVQRRVIELAYFGGLTQTEIAAELREPLGTVKTRMRAGMEKLRGSLAPLLSSEAS*