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13_2_20cm_scaffold_7051_10

Organism: 13_2_20CM_Gemmatimonadetes_69_8

partial RP 18 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: comp(8286..9968)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A406_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 75.8
  • Coverage: 565.0
  • Bit_score: 833
  • Evalue 1.10e-238
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 554.0
  • Bit_score: 854
  • Evalue 6.40e-245
RNA binding S1 domain protein similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 565.0
  • Bit_score: 837
  • Evalue 2.80e-240

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1683
ATGCTGGTAGATACTCAGGACCTTCCGGAATCCAAAGCCGAAGGTCCGGCTGCGCCGACCGCTCATTCCCACCTGCGCGTCCGTCCCGATCTCCACGAAGAGTACTCGCCGGACGAAATCGCCAAGATGACCGAGATGTACTCGAAAGTGCTGCGCGTGACGGATACCGCCGTCATCCTGGACGTGGGATTCAAGTCCGAGGGCGCCGTCCCGATCGACGAGTTCAAGGACGCGCACTCGCTCAAGGAAGGGGACGAGGTCGAGGTCTTCCTCGAGCACCTGGAGGATCAAGAGGGCGCGGTCGTCCTGTCGAAGAAGAAGGCCGACTTCATGCGGGTGTGGGAACGCATCCGCGAGGCCCACGAGAAGGACGAGGCGGTGAGCGGGACGCTGGTGAAGAAGATCAAGGGCGGCGTGGTGGTGGACTTGATGGGAGTGGACGCCTTCCTCCCCGGCAGCCAGATCGCGCTGCGCCGCGTCCCCAACATCGACGAGCTGCTCGGCCAGAGTTTCGAGTTCAAGATTATCAAGCTCAACAAGCGGCGTCGCAACATCGTCGTCTCGCGCCGCGTGCTGCTCGAGGCGGAGCGCAAGACCAAGCGCGACGTGCTGATGAAGGAGCTCCAGGTCGGCCAGGTGCGCAAGGGGATCGTGAAGAACATCACCGATTTCGGCGCCTTCATCGACCTCGGGGGCGTCGACGGCCTGCTGCACATCACCGATATGAGCTACGGCCGGGTCTCACACCCGTCCGAGCTCGTGCACATCGGGCAGGAGGTCGAGGTCAAAGTGCTCGACATCGACTGGGAGCGCGAGCGCATCAGCCTCGGCCTGAAGCAGCTGCAGCCGTATCCGTGGAAAGATGTGGCCGCGAAGTATCCCGTCGGGACCCGCGTGCAGGGGAAGGTGGTCTCGATCACCAACTACGGCGCGTTCGTCGAGCTCGAGCCCGGCATCGAGGGCCTGGTGCACATCTCGGAGATGAGCTGGACGCGCAACGTCCGCCACCCCTCCAAGATCGTGTCCATCGGGGAGACCATCGAGGCGGTGGTCCTCAAGGTGGACGAAACCGAAGAGAAGATCTCCCTCGGCATGAAGCAGACCGAGGAGGATCCCTGGATGGCGCTCCCGCAGAAGTATCCCGTCGGCACCCGCATCCGCGGCAAGGTGCGCAACCTCACGTCGTTCGGCGCGTTCGTGGAGATCGAGCCCGGCATCGACGGCCTGATCCACATCTCCGACATGTCGTGGACCAAACGGGTGCAGCACCCCTCCGAGGTCGTGAAGAAGGGCGACGAGGTGGAGGTCCTGATCCTGAACGTGGACGCCGAGAACAAGCGGATCTCGCTCGGCTTGAAGCAGGCGCAGGAGGACCCCTGGCTCAGGATCGGTGAGACGTACCCGGTCGGCACCGAGCTGCGGGGTCGTGTGCTGCGCCTCATGGACAAGGGCGTCGTGGTGGATCTGGGGAACGACATCGAGGGCTTCGTCCCGATGTCGCAGCTCGGCATTCCGGATTTGCAGAACCCGGCCGATGCGGTGAAAGAAGGCCAGGCCGCGGAGCTGAAGGTGCTGGAAGTGGACCCCATCCATCATCGGATCGTGCTGGCAGCGACCGGCTGGCCCAAAGACGACGGGGTTCAGGAAGCAGCGAAACAGGACGGCCAAAAACTAGACGCGTAG
PROTEIN sequence
Length: 561
MLVDTQDLPESKAEGPAAPTAHSHLRVRPDLHEEYSPDEIAKMTEMYSKVLRVTDTAVILDVGFKSEGAVPIDEFKDAHSLKEGDEVEVFLEHLEDQEGAVVLSKKKADFMRVWERIREAHEKDEAVSGTLVKKIKGGVVVDLMGVDAFLPGSQIALRRVPNIDELLGQSFEFKIIKLNKRRRNIVVSRRVLLEAERKTKRDVLMKELQVGQVRKGIVKNITDFGAFIDLGGVDGLLHITDMSYGRVSHPSELVHIGQEVEVKVLDIDWERERISLGLKQLQPYPWKDVAAKYPVGTRVQGKVVSITNYGAFVELEPGIEGLVHISEMSWTRNVRHPSKIVSIGETIEAVVLKVDETEEKISLGMKQTEEDPWMALPQKYPVGTRIRGKVRNLTSFGAFVEIEPGIDGLIHISDMSWTKRVQHPSEVVKKGDEVEVLILNVDAENKRISLGLKQAQEDPWLRIGETYPVGTELRGRVLRLMDKGVVVDLGNDIEGFVPMSQLGIPDLQNPADAVKEGQAAELKVLEVDPIHHRIVLAATGWPKDDGVQEAAKQDGQKLDA*