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13_2_20cm_scaffold_10884_4

Organism: 13_2_20CM_Actinobacteria_68_14

near complete RP 40 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: comp(3551..4657)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=2 Tax=Odoribacter RepID=H1DIF2_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 154.0
  • Bit_score: 92
  • Evalue 1.20e-15
ECF subfamily RNA polymerase sigma-24 subunit Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 27.4
  • Coverage: 354.0
  • Bit_score: 102
  • Evalue 9.40e-19
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 26.9
  • Coverage: 417.0
  • Bit_score: 89
  • Evalue 2.20e-15

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
ATGAGCGCGGTGCTCCATGCACCCGTTGCTCGCCCGACCGAGCCCGTCGAGCTGACCGAATACCTGTACGAGAATTACGGCCAGCGCGTCTTCACGTTCTGCTACAGCCGCCTTCGCAACCGCGAGGAGGCACAGGACGCGGCGCAGACGACCTTTATCTACGTGCTCCGCTCGCTTCAGCGCGGCGTCGTGCCCGAGTTCGAGCTCGCGTGGCTGCTCAAGATCGCGTTCAACGTCTGCCGAGGCACCCGGCGGTCGAGCGGGCGTCTCACCGCCGTCACCCAGGAGGTCGAAGACATCGACGAGCTCGCTGCGCCTCAGGCGGCCGGCCACGAGGGGAGCGAGCGGCTCGAGGCGCTGCGGGACGGGCTCGCGCATCTTCCCGAGCGCCAGCGTCGCGGCATCCTCCTGCGCGAGTGGCAGGGCCTCTCCTACGCGGAGATCGCCGATGAGCTCGATCTGAGCGTCGGAGCCGTCGAGACGCTCCTCTTCCGCGCGCGCCGCAACCTGGCGTCGCGGCTCCAGCACGTTCGCAGCGGCGTCGCCGCGATCAACGTCGTCACTTTGGCGCCGTTCCTTCGCTCGATCGCGCGAGGCGGTCTCGGCAAGCTCGGCCTGATCGGTGCGAGCGCGACCGTGGCGCTCGTCCCGGTCGTCGCAATTGAGATCGCGCCTGCTCTCGCGGACGGCGAGGCCGCCGTCACGCTTCGGTCCGCTGTTCCGGTCGAGCCGTCGAGTGCCCCGCAGCTCGCCACCACTGCCCATCACCCCACCGCCGAGGCGGCCGCCTCCCCCGGCGTGCTGCCCGCCGCCCGACACCGGCAGTTGCCGCAGCGGCCGACCACCGCAACAGAAGCCGCTGAGTCCACTCTCCTCACGGGTCCCACCGCCCCCGCCCCGGCTTCGGGCTCCCAGGAGCCAGCCCCGACGACACCCGAGCAAACGCTTTCACCGCCGCCGCTGAAGGCGCCGCCGTCGGCCCCGGTCGGCGTTCCCGTTCCGAACCTCGAGCCGCCGGCCGGGCTACCGCCGGCAGCCACCGACGCGCTCGACACGCTCACGACCGTGGTCAGCGGCGTCACCGAAACCCTCCCTGTAGGGAAGTAG
PROTEIN sequence
Length: 369
MSAVLHAPVARPTEPVELTEYLYENYGQRVFTFCYSRLRNREEAQDAAQTTFIYVLRSLQRGVVPEFELAWLLKIAFNVCRGTRRSSGRLTAVTQEVEDIDELAAPQAAGHEGSERLEALRDGLAHLPERQRRGILLREWQGLSYAEIADELDLSVGAVETLLFRARRNLASRLQHVRSGVAAINVVTLAPFLRSIARGGLGKLGLIGASATVALVPVVAIEIAPALADGEAAVTLRSAVPVEPSSAPQLATTAHHPTAEAAASPGVLPAARHRQLPQRPTTATEAAESTLLTGPTAPAPASGSQEPAPTTPEQTLSPPPLKAPPSAPVGVPVPNLEPPAGLPPAATDALDTLTTVVSGVTETLPVGK*