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13_2_20cm_scaffold_1230_9

Organism: 13_2_20CM_Actinobacteria_68_14

near complete RP 40 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: 7039..7647

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Solirubrobact_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 179.0
  • Bit_score: 152
  • Evalue 5.70e-34
RNA polymerase sigma-70 factor, ECF subfamily id=2115828 bin=GWD2_Chloroflexi_49_16 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 179.0
  • Bit_score: 145
  • Evalue 6.50e-32
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 177.0
  • Bit_score: 139
  • Evalue 7.70e-31

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Taxonomy

CG_Solirubrobact_01 → Rubrobacteridae → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGTCCTCTGAGGCTGCCAGCACGACCGGGCTGAGCCGCGGCGTTTCGTCCCAGGACTTGGCGCGACTCGTCGAGCAAGCTCAGCAGGGCAAGCGTGAGGCGCTCGAGGAGCTCTACCTGCTCCACTTCGATCGCATCTACAGCTACCTGCACATGAACGTCGGCAACCGCCACGACGCGGAAGACCTGACGACGCAGGTGTTCGTGAAGATGCTCGAGTCGATCGGCAAGTTCCGCTGGCGCTCCGCGCCGTTCTCTGCCTGGCTGTTCCGGATCGCGCACAACCTGGCGATGGATCACTTTCGCGCGAACAAGCGGTGGCAGCCCGAGGAGGAGGTGCCCGAGCCCGATCCCGGCGAGGGAAGTGCGGCCGAGCAGGAAGCGCTCGAGTCGATCGGCCGGGAGAGCATGCTGGAGCTGATCCAGAAGCTCTCGCACGAGCAGCAGCAGGTGCTGACGCTGAAGTTCGTCTTCAACTTCTCGAACGCCGAGGCGGCGACGATCCTCGACAAGACCGAGGGTGCGATCAAGTCGCTCCAGCACCGCGCGCTGGCATCTCTGCAGAGGCAGATCGCAACGTCGCCCGAATCGCCACCCCAGGAGCCGTAG
PROTEIN sequence
Length: 203
MSSEAASTTGLSRGVSSQDLARLVEQAQQGKREALEELYLLHFDRIYSYLHMNVGNRHDAEDLTTQVFVKMLESIGKFRWRSAPFSAWLFRIAHNLAMDHFRANKRWQPEEEVPEPDPGEGSAAEQEALESIGRESMLELIQKLSHEQQQVLTLKFVFNFSNAEAATILDKTEGAIKSLQHRALASLQRQIATSPESPPQEP*