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13_2_20cm_scaffold_2524_11

Organism: 13_2_20CM_Actinobacteria_68_14

near complete RP 40 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: comp(8535..9065)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFP9_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 37.3
  • Coverage: 161.0
  • Bit_score: 84
  • Evalue 9.10e-14
ECF subfamily RNA polymerase sigma-24 subunit Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.1
  • Coverage: 152.0
  • Bit_score: 105
  • Evalue 9.10e-20
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 161.0
  • Bit_score: 84
  • Evalue 2.50e-14

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 531
GTGACCACCAGAGAGACCAAGCGCCCGGCCCATCCGGCCGAGCTGACCCGGTACTTGTACGAAAAGCATGGCGGGCGCCTCTTCACATTCTGTTTTGCCCGACTTCGCGACCGCGAAGAAGCTCAGGACGCGGTCCAAACGACCTTCATCTACGTGCTCCGTTCGCTTCAGCGCGGCGTCGAGCCCGAGTTCGAGCTCGCTTGGTTGCTCAAGATCGGATTCAACGTCTGTCGCGAGGCAGAGCGGTCCGTCGGCCGTATCAACGCAACCACATGGGAGGTCGAAGACATGGACGAGCTGGCGGCACCCTCGGCCGACGACTACGAAGGGCCCGAGCAACTCGACGCGCTTCGAGAGGCACTCGCGACTCTGCCTGAGCGCCAGCGCCGGGCAATCCTGCTTCGAGAATGGCAAGGACTTTCGTACGCCGAAATCGCCGACGAGCTCCGGCTGACCGTCGGAGCGGTCGAAACGCTCCTTTACCGGGCGCGCCGCAGCCTGACATCGCGTTCGGCACTCTCGGCCCGCTGA
PROTEIN sequence
Length: 177
VTTRETKRPAHPAELTRYLYEKHGGRLFTFCFARLRDREEAQDAVQTTFIYVLRSLQRGVEPEFELAWLLKIGFNVCREAERSVGRINATTWEVEDMDELAAPSADDYEGPEQLDALREALATLPERQRRAILLREWQGLSYAEIADELRLTVGAVETLLYRARRSLTSRSALSAR*