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13_2_20cm_scaffold_531_19

Organism: 13_2_20CM_Actinobacteria_68_14

near complete RP 40 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: comp(19283..19867)

Top 3 Functional Annotations

Value Algorithm Source
Putative sigma factor SigB regulation protein rsbU n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9W6L7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 176.0
  • Bit_score: 178
  • Evalue 8.70e-42
Putative sigma factor SigB regulation protein rsbU {ECO:0000313|EMBL:EFL22548.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomy similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 176.0
  • Bit_score: 178
  • Evalue 1.20e-41
Sensor histidine kinase similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 165.0
  • Bit_score: 160
  • Evalue 4.00e-37

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Taxonomy

Streptomyces himastatinicus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGACGGACCAGAATCTGCAAGCCGCCGTCTCCGCCGGCGTCATGTCCGCCGAGAGCGAGCATCGTGCCCTGCTCCAGTCGATCGTCGAGGTCGCGCGGGCGATCTTCTCGGCGAAGGCCGCTTCGATCTTCCTGCACGACGACGCGGCCGACGAGCTCGTCTTCGAAGCGGTCGCCGGCGAAGGCTCGGACAGCCTGGTCGGCACGCGCTTCCCCTCGAGCACGGGGGTCGCCGGCTGGGTGCTCGTCACCCGTCAGCCGCTGATCATCGACGACCTCGAGCAGGATCCCCGGCACTCACGCGAGACCGCCAAGAGCACCGGCTACGTGCCGAAGGCGATGATGTCGGTGCCGCTCTTGCACGAGGAGCGAGCCCTTGGGGTGCTCAACGTGCTCGACCGCTCCCAAGAGATCGAGTTCTCGCTCGGCCAGATGGAGCTGCTCGGCCTGTTCGCGAACCAGGCTGCGATTGCGCTCGACCTTCTCCAGCGCGCGCGCCACGCACGCGCCGTGTTGACCCGAAGCGGCGGCGACGCCGGCGTCATCGCGCGAATCGCCTCGGCGCTCGAGNNNNNNNNGTTCTAG
PROTEIN sequence
Length: 195
MTDQNLQAAVSAGVMSAESEHRALLQSIVEVARAIFSAKAASIFLHDDAADELVFEAVAGEGSDSLVGTRFPSSTGVAGWVLVTRQPLIIDDLEQDPRHSRETAKSTGYVPKAMMSVPLLHEERALGVLNVLDRSQEIEFSLGQMELLGLFANQAAIALDLLQRARHARAVLTRSGGDAGVIARIASALEXXXF*