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13_2_20cm_scaffold_779_10

Organism: 13_2_20CM_Actinobacteria_68_14

near complete RP 40 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: comp(8171..8680)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NSX6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 169.0
  • Bit_score: 111
  • Evalue 1.10e-21
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 156.0
  • Bit_score: 251
  • Evalue 7.50e-64
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 162.0
  • Bit_score: 108
  • Evalue 2.10e-21

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 510
GTGCGGGCCTACGAAGTCCCGGTCTTCAACTACGTCATGCGCCTCGTCGGCGACCGCGCGCTGGCCGAAGATCTGACCCAGGAAGTCTTCATTCGCGTCTTCCAGGGGCTGCCGAAGTTCTCGCTCCGGTCGAAGTTCACGACCTGGCTCTTCCAGGTGACGAAGAACCGCGTCCTCGACGAGCTGCGCGCGAGCGAGCGCCGGCCACGGGCACTGGTCGCCTTGGACGACGCGCCGCAGCTCGAGGTCCTCGACGCGCCGGCCGAACAGGTCGAGACGATCGAAGCGCTGTGGACGGCCGTCGAAGGACTGAACACCGACCTGAAGATGGCGCTGCTCCTCCGGGACGTAGTCGGGCTCTCGTACAACGAGATCGCCGACTCGCTCGACACCACGCTCGCCACCGTCAAATGGCGGATCTTCAAGGCGCGAGAGGAAGTCCAGCTCGCGCTCGCGCGTGAAGGAATCAACTCCGGCCGCGACGCCGAAGTGATTCCGCTTAGTCGTTAG
PROTEIN sequence
Length: 170
VRAYEVPVFNYVMRLVGDRALAEDLTQEVFIRVFQGLPKFSLRSKFTTWLFQVTKNRVLDELRASERRPRALVALDDAPQLEVLDAPAEQVETIEALWTAVEGLNTDLKMALLLRDVVGLSYNEIADSLDTTLATVKWRIFKAREEVQLALAREGINSGRDAEVIPLSR*