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13_2_20cm_scaffold_1079_10

Organism: 13_2_20CM_Rokubacteria_69_10

partial RP 30 / 55 MC: 1 BSCG 28 / 51 ASCG 6 / 38
Location: 6083..6784

Top 3 Functional Annotations

Value Algorithm Source
rpfC; two-component system sensor-response regulator hybrid protein RpfC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.0
  • Coverage: 230.0
  • Bit_score: 248
  • Evalue 8.80e-63
Sigma-54 factor interaction domain-containing protein id=2883274 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 228.0
  • Bit_score: 216
  • Evalue 2.60e-53
two component, sigma54 specific, fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 159.0
  • Bit_score: 89
  • Evalue 1.40e-15

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGCGAGTCCTGGTCGTCGAGGACGAGCCGGATGTCAGCGCCGTCTTTCGCGACTTCCTGATCGAGCTCGGACACGAGTCGGTTCTCGTCCGGAGCGCAGAGGCAGCCCTGGCCAGCCTCGAGCACGAGCGCCCGGACGCGATCATCCTCGACATCCACCTCCCCGGGCTCAGCGGCCTCGACTTCCTCCAGCTCGGGCCCGTTCGTGAGTCGGGTCTACCGGTCATCGCGGTGTCCGGAGTCGCCACCGAAACTCAGGCCCGGGAATGCTTGCGGCTCGGAGCCTTCGACTTCCTCGGCAAACCGGTGGCCTTCGATCGCCTGGGAGAGGTCCTGGCCACTCTGGAGCCGCACGCGCTGCACCGACAGCTCTCGATGGTGGGCCGAAGCCCGGAGCGCCGGCGCGCCTCGCGCATCGAGGTGGTGTTCCCCATCCGGATCCTGCAATTCCACGGAGCCGAGTGGCAGGGATGGGCTCACGATCTGAGTCCGTTCGGCGTCAGCGTCAAGGGCGACGCGACCGTGCAGCCGGGCGAGGCGGTGAAGCTCTCGTTCACGCTGCCCGACGGCGGGCCGCCGGTGCGCGTCAGCTCACTCGTGCTACGAAACGACCGGGGCGCTCAAGCCTTCTACTTCGTGAACCTGACCGCGCAGGACTTCGAACGACTCGGAGAGTTCACCCGCCGGCACCTGACCCTGTGA
PROTEIN sequence
Length: 234
MRVLVVEDEPDVSAVFRDFLIELGHESVLVRSAEAALASLEHERPDAIILDIHLPGLSGLDFLQLGPVRESGLPVIAVSGVATETQARECLRLGAFDFLGKPVAFDRLGEVLATLEPHALHRQLSMVGRSPERRRASRIEVVFPIRILQFHGAEWQGWAHDLSPFGVSVKGDATVQPGEAVKLSFTLPDGGPPVRVSSLVLRNDRGAQAFYFVNLTAQDFERLGEFTRRHLTL*